Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01377 and BSU08280

See Amino acid alignment / Visit BSNT_01377 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:16
# Commandline: needle
#    -asequence dna-align/BSNT_01377.1.22522.seq
#    -bsequence dna-align/BSU08280___yfiI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01377-BSU08280___yfiI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01377-BSU08280___yfiI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01377
# 2: BSU08280___yfiI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1182
# Identity:    1004/1182 (84.9%)
# Similarity:  1004/1182 (84.9%)
# Gaps:         177/1182 (15.0%)
# Score: 5016.0
# 
#
#=======================================

BSNT_01377         0 --------------------------------------------------      0
                                                                       
BSU08280___yf      1 ATGATGCTAAATGGAGAAAGAATCATCTCTAAGCCGCTTCGCTGGGCAAT     50

BSNT_01377         0 --------------------------------------------------      0
                                                                       
BSU08280___yf     51 GGTAGGCGGCGGGCGGCTCAGCCAGGTTGGATATAAACATCGTATTGGAG    100

BSNT_01377         0 --------------------------------------------------      0
                                                                       
BSU08280___yf    101 CGCTGAGAGACAATACTGCTTTTCAATTAACTGCTGGCGCTTTTGATATC    150

BSNT_01377         1 ---------------------------GTGAACCTTGGAGTGGATGCGGA     23
                                                |||||||||||||||||||||||
BSU08280___yf    151 GATGCCGAAAGAGGAAAAGATTTCGGGGTGAACCTTGGAGTGGATGCGGA    200

BSNT_01377        24 ACGCTGTTATCCCAACTATCAAACCATGTTTGCCGAGGAAGCGAAAAGAC     73
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    201 ACGCTGTTATCCCAACTATCAAACCATGTTTGCCGAGGAAGCGAAAAGAC    250

BSNT_01377        74 AGGATGGCATAGAGGTAGTATCGATTGCCACTCCGAACGGCACTCATTAT    123
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    251 AGGATGGCATAGAGGTAGTATCGATTGCCACTCCGAACGGCACTCATTAT    300

BSNT_01377       124 GAGATTTGTAAGGCGGCGCTTGAAGCAGGAGTGCATGTCATCTGTGAAAA    173
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    301 GAGATTTGTAAGGCGGCGCTTGAAGCAGGAGTGCATGTCATCTGTGAAAA    350

BSNT_01377       174 ACCGCTGTTCTTCACTTCAGCAGAGGGGCAGGAAATCAAAGCGCTCGCAG    223
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    351 ACCGCTGTTCTTCACTTCAGCAGAGGGGCAGGAAATCAAAGCGCTCGCAG    400

BSNT_01377       224 AGAAAAAAGGGAAAATTGTCGGCGTGACGTACGGTTTTTCAGGCAATCAA    273
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    401 AGAAAAAAGGGAAAATTGTCGGCGTGACGTACGGTTTTTCAGGCAATCAA    450

BSNT_01377       274 ATGCTTCTTCAAATGCGTGCGATGATTGAACAAGGAATGATCGGCGATAT    323
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    451 ATGCTTCTTCAAATGCGTGCGATGATTGAACAAGGAATGATCGGCGATAT    500

BSNT_01377       324 TCGCGTGGTTGACTTGCAGTACACACACGGTTTTTGTGCAACAGATGAAG    373
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    501 TCGCGTGGTTGACTTGCAGTACACACACGGTTTTTGTGCAACAGATGAAG    550

BSNT_01377       374 GTGAAAAGATAAGCGCTGCACAGAAATGGCGTGTCGACCCTGCGATCGCC    423
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    551 GTGAAAAGATAAGCGCTGCACAGAAATGGCGTGTCGACCCTGCGATCGCC    600

BSNT_01377       424 GGGCCAAGCTTTGTGCTGGGCGATTTATCTACCCACACGTATTATATGTC    473
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    601 GGGCCAAGCTTTGTGCTGGGCGATTTATCTACCCACACGTATTATATGTC    650

BSNT_01377       474 ACAGCTTATTATGCCAAAGATGAAAATTAAGGAGCTGCTGTGTGACCGAC    523
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    651 ACAGCTTATTATGCCAAAGATGAAAATTAAGGAGCTGCTGTGTGACCGAC    700

BSNT_01377       524 AGAGCTTCGTCGGCAGCCGCGCACCGCTAGAGGATAATGCCCATGTGCTG    573
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    701 AGAGCTTCGTCGGCAGCCGCGCACCGCTAGAGGATAATGCCCATGTGCTG    750

BSNT_01377       574 ATGCATTATGAAAATGGAGCGGTCGGAACGATGTGGACATCGTCAATCAA    623
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    751 ATGCATTATGAAAATGGAGCGGTCGGAACGATGTGGACATCGTCAATCAA    800

BSNT_01377       624 TGCCGGATGTATGGATGGCCATAGAATCCGGATTGTTGGCTCAAAGGCAA    673
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU08280___yf    801 TGCCGGATGTATGGATGGCCATAGAATCCGGATTGTCGGCTCAAAGGCAA    850

BSNT_01377       674 GCATTGAGTGGTGGGACAGCAAGCCAAATGAACTGACGTATGAAGTGCAG    723
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    851 GCATTGAGTGGTGGGACAGCAAGCCAAATGAACTGACGTATGAAGTGCAG    900

BSNT_01377       724 GGAGAGCCGGGCCAGACACTCGTTCGCGGCATGCCGTATTTAGATGATGT    773
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    901 GGAGAGCCGGGCCAGACACTCGTTCGCGGCATGCCGTATTTAGATGATGT    950

BSNT_01377       774 TTGCAACGCCGATGAACGACTGGGCGCCTTACACAGCGAAGGGCTGTCCG    823
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf    951 TTGCAACGCCGATGAACGACTGGGCGCCTTACACAGCGAAGGGCTGTCCG   1000

BSNT_01377       824 AAGCATGGGCCAATATTTATCTTAAATTTGCCATTGCGATAGACGCCAAA    873
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf   1001 AAGCATGGGCCAATATTTATCTTAAATTTGCCATTGCGATAGACGCCAAA   1050

BSNT_01377       874 AACCGTGAAGATGAAGAAATCTTGAACAACTTGGTTTATCCTGACATTGA    923
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf   1051 AACCGTGAAGATGAAGAAATCTTGAACAACTTGGTTTATCCTGACATTGA   1100

BSNT_01377       924 TGCAGGGATCGAGGGCATTCGCTGGATTGAGAACTGCGTGCGCTCGGCAA    973
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08280___yf   1101 TGCAGGGATCGAGGGCATTCGCTGGATTGAGAACTGCGTGCGCTCGGCAA   1150

BSNT_01377       974 ACCAAGGGTCAGTTTGGGTTGAATTTAAATAA   1005
                     ||||||||||||||||||||||||||||||||
BSU08280___yf   1151 ACCAAGGGTCAGTTTGGGTTGAATTTAAATAA   1182


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.