Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01380 and BSU08290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:16
# Commandline: needle
# -asequence dna-align/BSNT_01380___yfiJ.1.22522.seq
# -bsequence dna-align/BSU08290___yfiJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01380___yfiJ-BSU08290___yfiJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01380___yfiJ-BSU08290___yfiJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01380___yfiJ
# 2: BSU08290___yfiJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1203
# Identity: 1137/1203 (94.5%)
# Similarity: 1137/1203 (94.5%)
# Gaps: 51/1203 ( 4.2%)
# Score: 5625.0
#
#
#=======================================
BSNT_01380___ 0 -------------------------------------------------- 0
BSU08290___yf 1 GTGAAAGCTCTTTTTTTTACGAGAATGTTCACCTTGATGGTGAGCTGTTT 50
BSNT_01380___ 1 -ATGTATCTGTCCATTGTGAAAGAGGATAACTGGTTTGGATATGTATTTA 49
|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 51 AATGTATCTGTCCATTGTGAAAGAGGATAACTGGTTTGGATATGTATTTA 100
BSNT_01380___ 50 TAGCAGCAGGTGCTGCCATGTATGCAGCCAATCATGTTTTGCTGACAAAA 99
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 101 TAGCAGCAGGTGCTGCCATGTATGCAGCCAATCATGTTTTGCTGACAAAA 150
BSNT_01380___ 100 GAGACAAATGCCATCTGGTTCTGCCTGATTGATATTGCAATCGGCTTTTC 149
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 151 GAGACAAATGCCATCTGGTTCTGCCTGATTGATATTGCAATCGGCTTTTC 200
BSNT_01380___ 150 GTTCGGATTTATCTTTCCCGGCACAGGTTTGTTCATTATTATGCTTTGTC 199
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 201 GTTCGGATTTATCTTTCCCGGCACAGGTTTGTTCATTATTATGCTTTGTC 250
BSNT_01380___ 200 CGGTTGCGGTCGCCTTTTTTCTGCGGGGGTTTCCTAAAAGAACAGCATGG 249
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 251 CGGTTGCGGTCGCCTTTTTTCTGCGGGGGTTTCCTAAAAGAACAGCATGG 300
BSNT_01380___ 250 TCTGTCTTATGTCTTTGCTCTATTTTATTTTTGATCGTTCTCATCCGTAC 299
||||||||||||||||.|||||||||||||||||.|||.|||||||||||
BSU08290___yf 301 TCTGTCTTATGTCTTTCCTCTATTTTATTTTTGACCGTCCTCATCCGTAC 350
BSNT_01380___ 300 ATATGCGATGTTCGGCAATGAATTTGTCATTGATCATTTGACTAGCATGA 349
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 351 ATATGCGATGTTCGGCAATGAATTTGTCATTGATCATTTGACTAGCATGA 400
BSNT_01380___ 350 CATTCGTTGTCTTTTGCGGAGTCGTCGGCAAATTAATCCGCAAGCTGTTG 399
|||||||||||||.|||||.|||||.||||||||||||||||||||||||
BSU08290___yf 401 CATTCGTTGTCTTCTGCGGTGTCGTGGGCAAATTAATCCGCAAGCTGTTG 450
BSNT_01380___ 400 GATGCGCAGGATACGGCAAAACAGCAGTTTCAGGAACTGACGGAGTCCCA 449
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 451 GATGCGCAGGATACGGCAAAACAGCAGTTTCAGGAACTGACGGAGTCCCA 500
BSNT_01380___ 450 TCTGGCGCTGTCTGCTGCACATCAGGAGCTCCATTTATATGCGAAGCAGG 499
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 501 TCTGGCGCTGTCTGCTGCACATCAGGAGCTCCATTTATATGCGAAGCAGG 550
BSNT_01380___ 500 TTGAAGAGCTGACTGCCATTTACGAGCGGAACAGAATGGCGCGGGAAATC 549
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08290___yf 551 TTGAAGAGCTGACTGCCATTTACGAGCGGAACAGAATGGCGCGTGAAATC 600
BSNT_01380___ 550 CATGATACAGTGGGGCATAAAATGACGGCCCTTCTCGTCCAGCTGCAGCT 599
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 601 CATGATACAGTGGGGCATAAAATGACGGCCCTTCTCGTCCAGCTGCAGCT 650
BSNT_01380___ 600 TTTGCGTGAATGGCAAAAAAGAGACAGCAAAAAAGCGGATGAGACAGTAG 649
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU08290___yf 651 TTTGCGTGAATGGCAAAAAAGAGACAGCCAAAAAGCGGATGAGACAGTAG 700
BSNT_01380___ 650 GTGTCTGTGAAACACTTGCCCGTGAAGCGCTTGATGATGTCCGCTTATCA 699
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 701 GTGTCTGTGAAACACTTGCCCGTGAAGCGCTTGATGATGTCCGCTTATCA 750
BSNT_01380___ 700 GTACGCACTCTGCAAACTGAAAACGATCCTTCGCTAATCGAATCGCTGAA 749
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 751 GTACGCACTCTGCAAACTGAAAACGATCCTTCGCTAATCGAATCGCTGAA 800
BSNT_01380___ 750 ACAGCTGACAGAGGACTTTTGCAAAAATGCAGGAGTCACAACAGAATTTG 799
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 801 ACAGCTGACAGAGGACTTTTGCAAAAATGCAGGAGTCACAACAGAATTTG 850
BSNT_01380___ 800 CGGTCAACGGTGATCCTGCAATCATCCCGCTGTCTCTCCATCCGACCCTG 849
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 851 CGGTCAGCGGTGATCCTGCAATCATCCCGCTGTCTCTCCATCCGACCCTG 900
BSNT_01380___ 850 ATCAGAACGGTGCAGGAAGCACTGACCAATGCCAAACGGCACGGCGGCGC 899
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 901 ATCAGAACGGTGCAGGAAGCACTGACCAATGCCAAACGGCACGGCGGCGC 950
BSNT_01380___ 900 CGCAGCTTGTTCGATACAGCTTGCCTGCACAACGGACAGCATCAGCCTTG 949
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 951 CGCAGCCTGTTCGATACAGCTTGCCTGCACAACGGACAGCATCAGCCTTG 1000
BSNT_01380___ 950 TCATTAAGGATGACGGCAAAGGCAATCCCGAGGCAGCACTTGGATTTGGT 999
||||||||||||||||||||||||||||.||||||||||||||.||||||
BSU08290___yf 1001 TCATTAAGGATGACGGCAAAGGCAATCCTGAGGCAGCACTTGGTTTTGGT 1050
BSNT_01380___ 1000 CTCTTGAATATGAAAAAGCGGGCAGCGGAACATGGCGGAACGATCCGCTT 1049
|||||||||||||||||||||||||||||.||||||||||.|||||||||
BSU08290___yf 1051 CTCTTGAATATGAAAAAGCGGGCAGCGGAGCATGGCGGAATGATCCGCTT 1100
BSNT_01380___ 1050 TGAAAGCGAACGGGATCAAGGATTTACTGTAAATGCAGAATTTTCACTCG 1099
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU08290___yf 1101 TGAAAGCGAACGGGATCAAGGATTTACTGTAAATGCAGAATTTTCACTTG 1150
BSNT_01380___ 1100 CCAATAAAAAATGGAGCTTCGGGCCCGTGCAGCAAAAGGAGAGTTTATCA 1149
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08290___yf 1151 CCAATAAAAAATGGAGCTTCGGGCCCGTGCAGCAAAAGGAGAGTTTATCA 1200
BSNT_01380___ 1150 TGA 1152
|||
BSU08290___yf 1201 TGA 1203
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