Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01388 and BSU08330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:17
# Commandline: needle
# -asequence dna-align/BSNT_01388___yfiN.1.22522.seq
# -bsequence dna-align/BSU08330___yfiN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01388___yfiN-BSU08330___yfiN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01388___yfiN-BSU08330___yfiN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01388___yfiN
# 2: BSU08330___yfiN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1158
# Identity: 1113/1158 (96.1%)
# Similarity: 1113/1158 (96.1%)
# Gaps: 0/1158 ( 0.0%)
# Score: 5385.0
#
#
#=======================================
BSNT_01388___ 1 GTGAAAAAAATTCTAGCCATTTGCGGCATTGAGCTTTCTCTCATTTTTAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 1 GTGAAAAAAATTCTAGCCATTTGCGGCATTGAGCTTTCTCTCATTTTTAA 50
BSNT_01388___ 51 GAAGCCACAGAACTATTTGATCATGTTTGCTGCCCCGCTTTTGCTTACCT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 51 GAAGCCACAGAACTATTTGATCATGTTTGCTGCCCCGCTTTTGCTTACCT 100
BSNT_01388___ 101 TTGTATTTGGGAGTATGCTCAGCGGCAATGATGATAAAGTGCGGCTTGCA 150
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU08330___yf 101 TTGTATTTGGGAGTATGCTCAGCGGCAATGATGATAAGGTGCGGCTTGCA 150
BSNT_01388___ 151 ATCGTTGATCAGGACGACACGATTCTCTCACAGCACTATATTCGGCAGCT 200
|||||||||||||||||.|||||||||||||||||.||||||||||||||
BSU08330___yf 151 ATCGTTGATCAGGACGATACGATTCTCTCACAGCATTATATTCGGCAGCT 200
BSNT_01388___ 201 AAAGGCGCATGATAATATGTATACATTCGAAAGCATGTCTGAAAACAAAG 250
.|||||.||.|||.||||||||..||||||||.|||||||||||.|||||
BSU08330___yf 201 GAAGGCACACGATGATATGTATGTATTCGAAAACATGTCTGAAAGCAAAG 250
BSNT_01388___ 251 CGTCAGATAAGCTGAAACAAAAGAAAATTGCCGGGATCATCGTCATTTCC 300
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 251 CGTCAGAAAAGCTGAAACAAAAGAAAATTGCCGGGATCATCGTCATTTCC 300
BSNT_01388___ 301 CGCTCGTTCCAGACACAGCTGGAAAAAGGCAAACATCCTGAGCTGATTTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 301 CGCTCGTTCCAGACACAGCTGGAAAAAGGCAAACATCCTGAGCTGATTTT 350
BSNT_01388___ 351 CCGTCACGGCCCCGAGCTGTCGGAAGCGCCGATGGTCAAACAATATGCAG 400
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU08330___yf 351 CCGTCACGGCCCTGAGCTGTCGGAAGCGCCGATGGTCAAACAATATGCAG 400
BSNT_01388___ 401 AAAGCACATTGGCAACGCTCAATATTCAGGTTACCGCGGCGAAAACGGCA 450
|||||.|||||||||||||||||||||||||.||||||||.|||||||||
BSU08330___yf 401 AAAGCGCATTGGCAACGCTCAATATTCAGGTGACCGCGGCAAAAACGGCA 450
BSNT_01388___ 451 GCTCAGACAGCGGGAGAGAGCTGGAAGGCGGCGTATAAAACAGTTTTCGC 500
.||||||||||||||||||.|||||||||||||||||||||.||||||||
BSU08330___yf 451 TCTCAGACAGCGGGAGAGAACTGGAAGGCGGCGTATAAAACGGTTTTCGC 500
BSNT_01388___ 501 CAAAAAACATGAAGATTCAGCTCCGGCTGTAAAACGACAGACGCTCAGCG 550
||||||||||||||||..||.|||||||||||.|||||||||||||||.|
BSU08330___yf 501 CAAAAAACATGAAGATATAGTTCCGGCTGTAACACGACAGACGCTCAGTG 550
BSNT_01388___ 551 ATAAAAAAGAGGGTGCGGAAGCGAGTGACACAGCCTCCAGAGCAGCAGGC 600
||||||||||||||||||||||.||||||||||||||||||||||||||.
BSU08330___yf 551 ATAAAAAAGAGGGTGCGGAAGCAAGTGACACAGCCTCCAGAGCAGCAGGG 600
BSNT_01388___ 601 TTTTCCATCCTGTTTGTCATGCTGACCATGATGGGAGCGGCTGGAACCAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 601 TTTTCCATCCTGTTTGTCATGCTGACCATGATGGGAGCGGCTGGAACCAT 650
BSNT_01388___ 651 TTTAGAAGCAAGAAAAAACGGCGTCTGGTCCAGATTGCTTACAGCCTCTG 700
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU08330___yf 651 TTTAGAAGCAAGAAAAAACGGCGTATGGTCCAGATTGCTTACAGCCTCTG 700
BSNT_01388___ 701 TCAGCCGAGTGGAAATCGGTGCTGGGTATGTGCTGTCCTTCTTTGTCATT 750
|||||||||..|||||||||||||||||||||||||||||||||||||||
BSU08330___yf 701 TCAGCCGAGCCGAAATCGGTGCTGGGTATGTGCTGTCCTTCTTTGTCATT 750
BSNT_01388___ 751 GGCTGGATTCAATTTGGCATATTGCTTCTTTCAACCCATTGGCTGATTGG 800
|||||||||||||||||.||||||||||||||.||||||||||||.||||
BSU08330___yf 751 GGCTGGATTCAATTTGGAATATTGCTTCTTTCCACCCATTGGCTGTTTGG 800
BSNT_01388___ 801 CATCAACTGGGGGAATCCGGCTGCGGTTATTGTATTAGTGTCACTTTTTC 850
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU08330___yf 801 CATCAACTGGGGGAATCCGGCTGCAGTTATTGTATTAGTGTCACTTTTTC 850
BSNT_01388___ 851 TATTGACCGTTGTCGGCATTGGATTGATGATTGCGGCCAATGTCAGAACG 900
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU08330___yf 851 TATTGACCGTTGTCGGCATTGGATTGATGATTGCGGCCAACGTCAGAACG 900
BSNT_01388___ 901 CCAGAACAGCAGCTCGCGTTTGGCAACTTGTTCGTCATCGCAACATGTAT 950
||||||||||||||.|||||.|||||||||||.|||||||||||||||||
BSU08330___yf 901 CCAGAACAGCAGCTTGCGTTCGGCAACTTGTTTGTCATCGCAACATGTAT 950
BSNT_01388___ 951 GGTGAGCGGGATGTATTGGCCGATCGACATTGAACCGAAATTTATGCAAT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 951 GGTGAGCGGGATGTATTGGCCGATCGACATTGAACCGAAATTTATGCAAT 1000
BSNT_01388___ 1001 CCATCGCTGAATTTCTTCCGCAAAAGTGGGCGATGAGCGGGCTGACGGAG 1050
|||||||||||||||||||||||||||||||||||||||||.||||.|||
BSU08330___yf 1001 CCATCGCTGAATTTCTTCCGCAAAAGTGGGCGATGAGCGGGTTGACAGAG 1050
BSNT_01388___ 1051 ATTATCGCTAACGGTGCCCGCGTCACAGATATTCTCGGAATCTGCGGCAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08330___yf 1051 ATTATCGCTAACGGTGCCCGCGTCACAGATATTCTCGGAATCTGCGGCAT 1100
BSNT_01388___ 1101 CTTGCTTGCTTTTGCAGCAATCACTTTCGCAGCGGGGCTTAAGGCGCTCC 1150
.||||||||.|||||.||.||||||||||||||||||||.||.|||||||
BSU08330___yf 1101 TTTGCTTGCATTTGCTGCGATCACTTTCGCAGCGGGGCTGAAAGCGCTCC 1150
BSNT_01388___ 1151 GAGCCTAA 1158
||||||||
BSU08330___yf 1151 GAGCCTAA 1158
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