Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01389 and BSU08340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:17
# Commandline: needle
# -asequence dna-align/BSNT_01389___padR.1.22522.seq
# -bsequence dna-align/BSU08340___padR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01389___padR-BSU08340___padR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01389___padR-BSU08340___padR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: BSU08340___padR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 518/549 (94.4%)
# Similarity: 518/549 (94.4%)
# Gaps: 0/549 ( 0.0%)
# Score: 2466.0
#
#
#=======================================
BSNT_01389___ 1 ATGAGAGTATTAAAATACGCCATATTAGGGCTTTTGCGAAAAGGCGAATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa 1 ATGAGAGTATTAAAATACGCCATATTAGGGCTTTTGCGAAAAGGCGAATT 50
BSNT_01389___ 51 GAGCGGATACGATATTACGAGTTATTTTAAAGAGGAGCTCGGCCAATTTT 100
|||.|||||||||||||||||||||||||||||||||||||||||.||||
BSU08340___pa 51 GAGTGGATACGATATTACGAGTTATTTTAAAGAGGAGCTCGGCCAGTTTT 100
BSNT_01389___ 101 GGAGCGCCAAACACAGCCAGATTTATCCCGAGCTCAAAAAGCTGACGGAT 150
||||||||||.||||||||||||||.||.|||||||||||||||||||||
BSU08340___pa 101 GGAGCGCCAAGCACAGCCAGATTTACCCTGAGCTCAAAAAGCTGACGGAT 150
BSNT_01389___ 151 GAAGGGTTTATTACGTTCCGGACAACGATTCAAGGCACGAAGCTGGAGAA 200
|||||.|||||.||||||||||||||||||||.|||||.|||||||||||
BSU08340___pa 151 GAAGGATTTATCACGTTCCGGACAACGATTCAGGGCACAAAGCTGGAGAA 200
BSNT_01389___ 201 AAAGATGTACACCCTGACAGACAACGGAAAACAGGAGCTTCATGCCTGGC 250
|||||||||||||||||||||||.||||||.||||||||.||||.|||||
BSU08340___pa 201 AAAGATGTACACCCTGACAGACAGCGGAAAGCAGGAGCTGCATGACTGGC 250
BSNT_01389___ 251 TGATCCGCCACCAGCCGATACCCGAGACGGTGAAGGATGAATTTATGCTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa 251 TGATCCGCCACCAGCCGATACCCGAGACGGTGAAGGATGAATTTATGCTG 300
BSNT_01389___ 301 AAGGCTTATTTTATTTCTTCTCTATCGCGGCAGGAGGCTTCTGATTTATT 350
|||||||||||.|||||||.|||||||||.|||||||||||||||||.||
BSU08340___pa 301 AAGGCTTATTTCATTTCTTGTCTATCGCGCCAGGAGGCTTCTGATTTGTT 350
BSNT_01389___ 351 TACAGACCAGCTTCAAAAACGCAAGGCTAAGCTGTCCGATCTGCAGGAAA 400
.|.|||||||||.|||||||||.||||.|||||.||.||..|.||||.||
BSU08340___pa 351 CAAAGACCAGCTGCAAAAACGCCAGGCCAAGCTTTCTGACTTACAGGGAA 400
BSNT_01389___ 401 GCTATGAAAAGCTTATGGCTTCAGCAAAGCCGATGTCGTTTTCTTCACCG 450
||||||||||||||||||||||||||.||||||||||.||||||||||||
BSU08340___pa 401 GCTATGAAAAGCTTATGGCTTCAGCAGAGCCGATGTCATTTTCTTCACCG 450
BSNT_01389___ 451 GACTTCGGCCACTATCTTGTGCTGACGAAAGCGCTGGAGCGGGAGAAAAA 500
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU08340___pa 451 GACTTCGGCCACTATCTTGTGCTAACGAAAGCGCTGGAGCGGGAGAAAAA 500
BSNT_01389___ 501 TTACGTTTCTTGGCTGGAATCAATTTTAGCTATGATAGATAAGGATTAA 549
|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa 501 TTACGTTTCTTGGCTGGAATCAATTTTAGCTATGATAGATAAGGATTAA 549
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