Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01389 and BSU08340

See Amino acid alignment / Visit BSNT_01389 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:17
# Commandline: needle
#    -asequence dna-align/BSNT_01389___padR.1.22522.seq
#    -bsequence dna-align/BSU08340___padR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01389___padR-BSU08340___padR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01389___padR-BSU08340___padR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: BSU08340___padR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity:     518/549 (94.4%)
# Similarity:   518/549 (94.4%)
# Gaps:           0/549 ( 0.0%)
# Score: 2466.0
# 
#
#=======================================

BSNT_01389___      1 ATGAGAGTATTAAAATACGCCATATTAGGGCTTTTGCGAAAAGGCGAATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa      1 ATGAGAGTATTAAAATACGCCATATTAGGGCTTTTGCGAAAAGGCGAATT     50

BSNT_01389___     51 GAGCGGATACGATATTACGAGTTATTTTAAAGAGGAGCTCGGCCAATTTT    100
                     |||.|||||||||||||||||||||||||||||||||||||||||.||||
BSU08340___pa     51 GAGTGGATACGATATTACGAGTTATTTTAAAGAGGAGCTCGGCCAGTTTT    100

BSNT_01389___    101 GGAGCGCCAAACACAGCCAGATTTATCCCGAGCTCAAAAAGCTGACGGAT    150
                     ||||||||||.||||||||||||||.||.|||||||||||||||||||||
BSU08340___pa    101 GGAGCGCCAAGCACAGCCAGATTTACCCTGAGCTCAAAAAGCTGACGGAT    150

BSNT_01389___    151 GAAGGGTTTATTACGTTCCGGACAACGATTCAAGGCACGAAGCTGGAGAA    200
                     |||||.|||||.||||||||||||||||||||.|||||.|||||||||||
BSU08340___pa    151 GAAGGATTTATCACGTTCCGGACAACGATTCAGGGCACAAAGCTGGAGAA    200

BSNT_01389___    201 AAAGATGTACACCCTGACAGACAACGGAAAACAGGAGCTTCATGCCTGGC    250
                     |||||||||||||||||||||||.||||||.||||||||.||||.|||||
BSU08340___pa    201 AAAGATGTACACCCTGACAGACAGCGGAAAGCAGGAGCTGCATGACTGGC    250

BSNT_01389___    251 TGATCCGCCACCAGCCGATACCCGAGACGGTGAAGGATGAATTTATGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa    251 TGATCCGCCACCAGCCGATACCCGAGACGGTGAAGGATGAATTTATGCTG    300

BSNT_01389___    301 AAGGCTTATTTTATTTCTTCTCTATCGCGGCAGGAGGCTTCTGATTTATT    350
                     |||||||||||.|||||||.|||||||||.|||||||||||||||||.||
BSU08340___pa    301 AAGGCTTATTTCATTTCTTGTCTATCGCGCCAGGAGGCTTCTGATTTGTT    350

BSNT_01389___    351 TACAGACCAGCTTCAAAAACGCAAGGCTAAGCTGTCCGATCTGCAGGAAA    400
                     .|.|||||||||.|||||||||.||||.|||||.||.||..|.||||.||
BSU08340___pa    351 CAAAGACCAGCTGCAAAAACGCCAGGCCAAGCTTTCTGACTTACAGGGAA    400

BSNT_01389___    401 GCTATGAAAAGCTTATGGCTTCAGCAAAGCCGATGTCGTTTTCTTCACCG    450
                     ||||||||||||||||||||||||||.||||||||||.||||||||||||
BSU08340___pa    401 GCTATGAAAAGCTTATGGCTTCAGCAGAGCCGATGTCATTTTCTTCACCG    450

BSNT_01389___    451 GACTTCGGCCACTATCTTGTGCTGACGAAAGCGCTGGAGCGGGAGAAAAA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU08340___pa    451 GACTTCGGCCACTATCTTGTGCTAACGAAAGCGCTGGAGCGGGAGAAAAA    500

BSNT_01389___    501 TTACGTTTCTTGGCTGGAATCAATTTTAGCTATGATAGATAAGGATTAA    549
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU08340___pa    501 TTACGTTTCTTGGCTGGAATCAATTTTAGCTATGATAGATAAGGATTAA    549


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