Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01394 and BSU08380

See Amino acid alignment / Visit BSNT_01394 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:18
# Commandline: needle
#    -asequence dna-align/BSNT_01394___yfiS.1.22522.seq
#    -bsequence dna-align/BSU08380___yfiS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01394___yfiS-BSU08380___yfiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01394___yfiS-BSU08380___yfiS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01394___yfiS
# 2: BSU08380___yfiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1254
# Identity:    1177/1254 (93.9%)
# Similarity:  1177/1254 (93.9%)
# Gaps:           0/1254 ( 0.0%)
# Score: 5577.0
# 
#
#=======================================

BSNT_01394___      1 ATGGAAAAACCGTTGTTTCGCAATCAAAAAGGACTGATGACACTGTTAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf      1 ATGGAAAAACCGTTGTTTCGCAATCAAAAAGGACTGATGACACTGTTAGC     50

BSNT_01394___     51 CTCGCAAACCATTTCTTCACTTGGAGACTGGCTTCACATTTTGGCCGTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf     51 CTCGCAAACCATTTCTTCACTTGGAGACTGGCTTCACATTTTGGCCGTGC    100

BSNT_01394___    101 TAACATTAGCCGCTTTTCAGCTTCATGCTTCTCCATTAGATATGTCGCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf    101 TAACATTAGCCGCTTTTCAGCTTCATGCTTCTCCATTAGATATGTCGCTT    150

BSNT_01394___    151 TTAATGATGTCGTTTGCTTTGCCTGTCATTGTACTCGGACCTGTATCGGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf    151 TTAATGATGTCGTTTGCTTTGCCTGTCATTGTACTCGGACCTGTATCGGG    200

BSNT_01394___    201 TCTGCTTGCCGACCGTTTTGACAGAAAAACGATCATGTTTCTGTCTGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU08380___yf    201 TCTGCTTGCCGACCGTTTTGACAGAAAAACGATCATGTTTCTATCTGAAA    250

BSNT_01394___    251 TCGGACGTGCCCTCACCGTTATCAGCTGCGTTTATGTCAGTGAGCTTTGG    300
                     ||||.|||||||||||.|||||||||||||||||||||||||||||||||
BSU08380___yf    251 TCGGCCGTGCCCTCACTGTTATCAGCTGCGTTTATGTCAGTGAGCTTTGG    300

BSNT_01394___    301 CAGCTTTACGTATTGCTATGCCTTCAGAGCTGTTTTTCTTCACTTTTTTC    350
                     |||||||||||||||||||.|.|||||||||||||||||||||||||||.
BSU08380___yf    301 CAGCTTTACGTATTGCTATCCGTTCAGAGCTGTTTTTCTTCACTTTTTTT    350

BSNT_01394___    351 ACCTGCTAAAAACGGAAAGCTTAAGGAATTGGCTCCGGAAGCACACATTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf    351 ACCTGCTAAAAACGGAAAGCTTAAGGAATTGGCTCCGGAAGCACACATTC    400

BSNT_01394___    401 AGCAGGCTGTTTCCGCCAGCAGCATCATTGATAACAGTGCAAAAATCTTC    450
                     |||||||.|||||||.|||||||||||||||||||||..|||||||||||
BSU08380___yf    401 AGCAGGCCGTTTCCGTCAGCAGCATCATTGATAACAGCTCAAAAATCTTC    450

BSNT_01394___    451 GGCCCTGCCCTTGGCGGCATGCTGATCGCTGCTGTCTCTATACATTCTGT    500
                     |||||||||||||||||||.|||||||||||||.||||.|||||.|||||
BSU08380___yf    451 GGCCCTGCCCTTGGCGGCACGCTGATCGCTGCTTTCTCGATACACTCTGT    500

BSNT_01394___    501 TTTCTATATTAACGCCGGCGCCTTTCTTCTTTCCGCTGTCATTTTGTTTT    550
                     |||.|||||.||||||||||||||..||||||||||||||||||||||||
BSU08380___yf    501 TTTTTATATAAACGCCGGCGCCTTCTTTCTTTCCGCTGTCATTTTGTTTT    550

BSNT_01394___    551 TCCTCCCCAAAGATGCTTTTTTACAAAAAGCCAATACACCTCAAGAAAAA    600
                     ||||.||||.||||||||||||||||||||||||||||||||||||||||
BSU08380___yf    551 TCCTTCCCAGAGATGCTTTTTTACAAAAAGCCAATACACCTCAAGAAAAA    600

BSNT_01394___    601 ACATCAGCACTTGCTTCTATTAAAGAAGGCCTTCAGTATTTGAAACGGAT    650
                     |||.||||||||.|||||||.||.|||||||||||||.||||||||||||
BSU08380___yf    601 ACAGCAGCACTTACTTCTATCAAGGAAGGCCTTCAGTTTTTGAAACGGAT    650

BSNT_01394___    651 GCCACTTCTTTTAATAGGCTTACTCACAGCTTGCGTCGTTCTCTTTGTTT    700
                     |||.|||||.||||.|||||||||.||||||||.||||||||||||||||
BSU08380___yf    651 GCCGCTTCTATTAACAGGCTTACTAACAGCTTGTGTCGTTCTCTTTGTTT    700

BSNT_01394___    701 TGCAGATTGGTGATTCCCAGGCTATCATTCTTATCCGTTCTTTTTCAGGC    750
                     |||||||||||||||||||.||.||.|||||||||||.||.||||||||.
BSU08380___yf    701 TGCAGATTGGTGATTCCCAAGCGATTATTCTTATCCGCTCCTTTTCAGGA    750

BSNT_01394___    751 GCTCCGCCTGAGCTTGCAGGCTGGTGCATGGCCGTCAGCGGAGCCGGCAT    800
                     ||||||||.|||||.||||||||||||||||||||.|||||||||||.||
BSU08380___yf    751 GCTCCGCCCGAGCTGGCAGGCTGGTGCATGGCCGTAAGCGGAGCCGGGAT    800

BSNT_01394___    801 GCTCCTTACGGCGGCAATTGCCGGCAGACGGCGAATCACCTCTTATTTTC    850
                     |||||||||.|||||.|||.|||||||||||||||||||.||||||||.|
BSU08380___yf    801 GCTCCTTACAGCGGCCATTACCGGCAGACGGCGAATCACTTCTTATTTGC    850

BSNT_01394___    851 TTTATTTCTCAGCTGGGACCTTTCTGCTTGGACTAGCAACTGGAGGCGTG    900
                     ||||||||||||||||.|||.||||.||||||||||||||||||||.|.|
BSU08380___yf    851 TTTATTTCTCAGCTGGAACCCTTCTTCTTGGACTAGCAACTGGAGGTGCG    900

BSNT_01394___    901 CCATTTCTGAGCGGAATGGGAATTGCCGGCATTGCTCTTTTTATTTTCGC    950
                     |||||.||.|||||.|||||||||||||||||..||||.|||||.||.||
BSU08380___yf    901 CCATTCCTAAGCGGTATGGGAATTGCCGGCATCACTCTCTTTATATTTGC    950

BSNT_01394___    951 TTTTTTCATCATGGGAGCGGCTTTTGGTCTGGTCCATATTCCATTTCAAA   1000
                     |||||||||||||||.||||||||.||.||.|||||||||||||||||.|
BSU08380___yf    951 TTTTTTCATCATGGGGGCGGCTTTCGGCCTCGTCCATATTCCATTTCAGA   1000

BSNT_01394___   1001 TTCTCGTGCAAACAACAGTGCCGGTTGATTACAGCGGCAGGGTGTTTGGC   1050
                     ||||||||||||||||||||||.||.|||||||||||.||||||||.|||
BSU08380___yf   1001 TTCTCGTGCAAACAACAGTGCCTGTCGATTACAGCGGTAGGGTGTTCGGC   1050

BSNT_01394___   1051 GCCATTCAGAGCGCGACAACCCTCGCCTCCATCCTCGGCATGGCGGGCGG   1100
                     ||.||||||||.|||||||||||||||||.||||||||||||||||||||
BSU08380___yf   1051 GCTATTCAGAGTGCGACAACCCTCGCCTCTATCCTCGGCATGGCGGGCGG   1100

BSNT_01394___   1101 AGGCATGCTGGCGGAATGGATCGGTGTTTCACTTGCTTTTCTTGTCTGTG   1150
                     .|||.||||||||||||||||||||||.||||||||||||||||||||||
BSU08380___yf   1101 GGGCGTGCTGGCGGAATGGATCGGTGTATCACTTGCTTTTCTTGTCTGTG   1150

BSNT_01394___   1151 GCTGCTTGCTGATCTTGATTGGGTTGATTACACTTGTAGGTAAGAAAGTT   1200
                     ||||||||||||||.||||||||||||||||||||.|||||||||||.||
BSU08380___yf   1151 GCTGCTTGCTGATCATGATTGGGTTGATTACACTTATAGGTAAGAAAATT   1200

BSNT_01394___   1201 TCAGAAAGCAGGCGATATCTTGTCACCAAAAGTAACAAAGGAGCACAAGG   1250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf   1201 GCAGAAAGCAGGCGATATCTTGTCACCAAAAGTAACAAAGGAGCACAAGG   1250

BSNT_01394___   1251 ATAA   1254
                     ||||
BSU08380___yf   1251 ATAA   1254


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