Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01435 and BSU08640

See Amino acid alignment / Visit BSNT_01435 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:23
# Commandline: needle
#    -asequence dna-align/BSNT_01435___yfhS.1.22522.seq
#    -bsequence dna-align/BSU08640___yfhS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01435___yfhS-BSU08640___yfhS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01435___yfhS-BSU08640___yfhS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01435___yfhS
# 2: BSU08640___yfhS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity:     225/225 (100.0%)
# Similarity:   225/225 (100.0%)
# Gaps:           0/225 ( 0.0%)
# Score: 1125.0
# 
#
#=======================================

BSNT_01435___      1 ATGTATGTCGGACGTGATATGAGCGAATTGAACATGGTTTCCAAAAAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08640___yf      1 ATGTATGTCGGACGTGATATGAGCGAATTGAACATGGTTTCCAAAAAAGA     50

BSNT_01435___     51 TTGGAAGAACAGTGAACTCGCTTATTTTCATCATGCCTTTCAGCAAATTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08640___yf     51 TTGGAAGAACAGTGAACTCGCTTATTTTCATCATGCCTTTCAGCAAATTA    100

BSNT_01435___    101 TGCCTTATTTGAACGAAGAAGGCCAATCAAAATACCGGGAATTAACGCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08640___yf    101 TGCCTTATTTGAACGAAGAAGGCCAATCAAAATACCGGGAATTAACGCAA    150

BSNT_01435___    151 GAAATTGAAGCGCGCGGCGGAATGAAGCGCAATGAAGCGGACTACAGCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08640___yf    151 GAAATTGAAGCGCGCGGCGGAATGAAGCGCAATGAAGCGGACTACAGCCA    200

BSNT_01435___    201 CGGCACGCGCGTCTCTTACGATTAA    225
                     |||||||||||||||||||||||||
BSU08640___yf    201 CGGCACGCGCGTCTCTTACGATTAA    225


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.