Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01497 and BSU08810

See Amino acid alignment / Visit BSNT_01497 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:25
# Commandline: needle
#    -asequence dna-align/BSNT_01497.1.22522.seq
#    -bsequence dna-align/BSU08810___senS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01497-BSU08810___senS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01497-BSU08810___senS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01497
# 2: BSU08810___senS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity:     179/219 (81.7%)
# Similarity:   179/219 (81.7%)
# Gaps:          36/219 (16.4%)
# Score: 879.0
# 
#
#=======================================

BSNT_01497         1 ---------------------ATGGGAGTCAAAAAAGAAAAGGGGAGAAA     29
                                          |||||||||||||||||||||||||||||
BSU08810___se      1 ATGAAAAAGGGGGGATTATTGATGGGAGTCAAAAAAGAAAAGGGGAGAAA     50

BSNT_01497        30 ACGATTTAGGAAGCGAAAAACCTTCGGGAATCAGATTTTGCCGCTTGAGC     79
                     ||||||.||||||||||||||||.||||||||||||||||||||||||||
BSU08810___se     51 ACGATTCAGGAAGCGAAAAACCTACGGGAATCAGATTTTGCCGCTTGAGC    100

BSNT_01497        80 TGCTGATTGAAAAAAACAAACGAGAGATTATAAACAGCGCGGAGCTCATG    129
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08810___se    101 TGCTGATTGAAAAAAACAAACGAGAGATTATAAACAGCGCGGAACTCATG    150

BSNT_01497       130 GAAGAAATTTATATGAAGATTGATGAGAAGCATACGCAATGTGTAACTAA    179
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08810___se    151 GAAGAAATTTATATGAAGATTGATGAGAAGCATACGCAATGTGTAACTAA    200

BSNT_01497       180 ATAG---------------    183
                     |||.               
BSU08810___se    201 ATATAAAAAAACCCGCTGA    219


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