Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01519 and BSU08960

See Amino acid alignment / Visit BSNT_01519 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:28
# Commandline: needle
#    -asequence dna-align/BSNT_01519___yhbF.1.22522.seq
#    -bsequence dna-align/BSU08960___yhbF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01519___yhbF-BSU08960___yhbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01519___yhbF-BSU08960___yhbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01519___yhbF
# 2: BSU08960___yhbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 708
# Identity:     698/708 (98.6%)
# Similarity:   698/708 (98.6%)
# Gaps:           0/708 ( 0.0%)
# Score: 3450.0
# 
#
#=======================================

BSNT_01519___      1 ATGGAGACAACAAAACTGGGAAATTTAAAATTATATGGCGCTGGGCATGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh      1 ATGGAGACAACAAAACTGGGAAATTTAAAATTATATGGCGCTGGGCATGC     50

BSNT_01519___     51 CGCAGGAGGCGCGTATCACAATGTCAGCATCAAAGGAGAAGGTGTAGTTG    100
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08960___yh     51 CGCAGGAGGCGCGTATCACAATGTCAGCATCAAAGGAGAAGGTATAGTTG    100

BSNT_01519___    101 GAGAAGGGCTGTCTGCTGTAGGATGCCGCATATACGGAACGGGCCTTTTT    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU08960___yh    101 GAGAAGGGCTGTCTGCTGTAGGCTGCCGCATATACGGAACGGGCCTTTTT    150

BSNT_01519___    151 CTCGGAAAAGCAGAGACTGAGCGGCTGCGTGTGCTCGGAGAAAGTGAATG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    151 CTCGGAAAAGCAGAGACTGAGCGGCTGCGTGTGCTCGGAGAAAGTGAATG    200

BSNT_01519___    201 TAAAGGCGATCTGACAGCCGGCAAAATCAATATATATGGGATAATGAAAG    250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU08960___yh    201 TAAAGGCGATCTGACAGCCGGCAAAATCAATATATATGGGACAATGAAAG    250

BSNT_01519___    251 TCAGCGGCTCACTTCAATTTGATCGATTCAATCTGAAAGGCCAGACTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    251 TCAGCGGCTCACTTCAATTTGATCGATTCAATCTGAAAGGCCAGACTGAA    300

BSNT_01519___    301 ATTGGCGGGAATATGACTGGAGAATCCTGCGATGTGAAAGGGAAGCTTAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    301 ATTGGCGGGAATATGACTGGAGAATCCTGCGATGTGAAAGGGAAGCTTAG    350

BSNT_01519___    351 CGTAAAAGGTGATTGTGAAACAGAAATGTTCCATGTCACAGGCTGTGTTG    400
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    351 CGTAATAGGTGATTGTGAAACAGAAATGTTCCATGTCACAGGCTGTGTTG    400

BSNT_01519___    401 ATGTATCGGGGTTATTAAATTCGGGTGAGATCAAGCTGGGATTGAGCCAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    401 ATGTATCGGGGTTATTAAATTCGGGTGAGATCAAGCTGGGATTGAGCCAT    450

BSNT_01519___    451 GATATAAGCCATGTGCAGGAAATCGGCGGAACAACAATTACAGTGAAAAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    451 GATATAAGCCATGTGCAGGAAATCGGCGGAACAACAATTACAGTGAAAAG    500

BSNT_01519___    501 ACGCGCGAGTTTTTTTAACCGGAAGAAAGTGAAGCTGATCGCCGATGTCA    550
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU08960___yh    501 ACGCGCGAGTTTTTTTAGCCGGAAGAAAGGGAAGCTGATCGCCGATGTCA    550

BSNT_01519___    551 TAGAAGGAGATCGGGTTTATTTGGAGAATACCGAAGCGGCAGTTGTCAGG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08960___yh    551 TAGAAGGAGATCGGGTTTATTTGGAGAATACCGAAGCGGCAGTTGTCAGG    600

BSNT_01519___    601 GGAAAAGAAGTGATCATCGGGCCGGGATGCAGTATCGGAACAATTGAGTA    650
                     ||||||||||||||||||||||||||||||||.||||||||.||||||||
BSU08960___yh    601 GGAAAAGAAGTGATCATCGGGCCGGGATGCAGCATCGGAACGATTGAGTA    650

BSNT_01519___    651 CGAAAACAAATATGAATGCGATCCGCATTCACAGATTAAAGAAAAAACAA    700
                     ||||.||||||.||||||||||||||||||||||||||||||||||||||
BSU08960___yh    651 CGAATACAAATGTGAATGCGATCCGCATTCACAGATTAAAGAAAAAACAA    700

BSNT_01519___    701 AACTGTAA    708
                     ||||||||
BSU08960___yh    701 AACTGTAA    708


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