Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01538 and BSU09090

See Amino acid alignment / Visit BSNT_01538 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:30
# Commandline: needle
#    -asequence dna-align/BSNT_01538___yhcI.1.22522.seq
#    -bsequence dna-align/BSU09090___yhcI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01538___yhcI-BSU09090___yhcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01538___yhcI-BSU09090___yhcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01538___yhcI
# 2: BSU09090___yhcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity:     937/942 (99.5%)
# Similarity:   937/942 (99.5%)
# Gaps:           0/942 ( 0.0%)
# Score: 4665.0
# 
#
#=======================================

BSNT_01538___      1 ATGCTTAATTTGATTTATAATGAGTGGCTCAAAATTTTCAGCCGTGCCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh      1 ATGCTTAATTTGATTTATAATGAGTGGCTCAAAATTTTCAGCCGTGCCGG     50

BSNT_01538___     51 AACATGGGTGATGATCGGAATTCTGGGGCTGACAATGGTTGGATTTGCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh     51 AACATGGGTGATGATCGGAATTCTGGGGCTGACAATGGTTGGATTTGCAT    100

BSNT_01538___    101 TTTTGGCGAATCATTTTTCTGCTGGTGAATCAAATTCCCATTGGAAACAA    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU09090___yh    101 TTTTGGCGAATCATTTTTCTGCCGGTGAATCAAATTCCCATTGGAAACAA    150

BSNT_01538___    151 GAACTTCAAGCACAAAACGCCGAATTAAAGAAAGAAATCAAAGAAGATCC    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    151 GAGCTTCAAGCACAAAACGCCGAATTAAAGAAAGAAATCAAAGAAGATCC    200

BSNT_01538___    201 TTCACTGAAAGATGGGTATAAAGAAACAATCACACTCAACGACTATCGCA    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU09090___yh    201 TTCACTGAAAGATGGGTATAAAGAAACAATCACACTCAATGACTATCGCA    250

BSNT_01538___    251 TCGAGCATAATATCCCTAGTGACACGGGCTATACGGTATGGTCTTATGTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    251 TCGAGCATAATATCCCTAGTGACACGGGCTATACGGTATGGTCTTATGTA    300

BSNT_01538___    301 ACGGATTCAGCAAACTTTACCATCCTTACCGGTCTGTTTACTATTATCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    301 ACGGATTCAGCAAACTTTACCATCCTTACCGGTCTGTTTACTATTATCAT    350

BSNT_01538___    351 CGCGGCCGGAATTGTCGCGAACGAATTTAATTGGGGAACGATTAAGCTAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    351 CGCGGCCGGAATTGTCGCGAACGAATTTAATTGGGGAACGATTAAGCTAT    400

BSNT_01538___    401 TAATGATTCGGCCGCTCAGTCGTTTTCAAATTTTGATGTCCAAATATATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    401 TAATGATTCGGCCGCTCAGTCGTTTTCAAATTTTGATGTCCAAATATATT    450

BSNT_01538___    451 ACAGTTCTCCTGTTTGGGCTCCTGTTGCTGTTGATTTTATTTATCGGTTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    451 ACAGTTCTCCTGTTTGGGCTCCTGTTGCTGTTGATTTTATTTATCGGTTC    500

BSNT_01538___    501 TACTTTATTAGGGTTGATCTTCTTCGGAACGGGTGGTGAAACCGCCGCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    501 TACTTTATTAGGGTTGATCTTCTTCGGAACGGGTGGTGAAACCGCCGCGA    550

BSNT_01538___    551 ATATTCATTTAATCTATAAGGATGGCCATGTCATTGAGCAAAACATGATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    551 ATATTCATTTAATCTATAAGGATGGCCATGTCATTGAGCAAAACATGATG    600

BSNT_01538___    601 GGGCATTTGGCCACAACGTATCTTTCTGAATCCGTCTCGGCTTTAATGGT    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU09090___yh    601 GGGCATTTGGCTACAACGTATCTTTCTGAATCCGTCTCGGCTTTAATGGT    650

BSNT_01538___    651 GGCGACGATGGCGTTTATGCTGTCTGCGGTATTCAGAAACAGCTCTCTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    651 GGCGACGATGGCGTTTATGCTGTCTGCGGTATTCAGAAACAGCTCTCTTG    700

BSNT_01538___    701 CGGTTGGTTTTTCCATCTTCTTGTTGGTTGCCGGTACGATTGCAACTGCA    750
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU09090___yh    701 CGGTTGGTTTTTCCATCTTCTTGTTGGTTGCCGGTACGACTGCAACTGCA    750

BSNT_01538___    751 TTTATTGCAGCGAAATTTGACTGGGCAAAGTATATATTGTTTGCTAATGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    751 TTTATTGCAGCGAAATTTGACTGGGCAAAGTATATATTGTTTGCTAATGT    800

BSNT_01538___    801 CGACTTGACTCAGTATGTGGATGGCACACCGTTAATAAAAGGGATGACTA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    801 CGACTTGACTCAGTATGTGGATGGCACACCGTTAATAAAAGGGATGACTA    850

BSNT_01538___    851 TGACGTTTTCTCTCGTCATGCTGGCGATCTACTTTATCATCTTCCTGTTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    851 TGACGTTTTCTCTCGTCATGCTGGCGATCTACTTTATCATCTTCCTGTTG    900

BSNT_01538___    901 CTTGCTTTCGGAATCTTCATGAAGCGGGATATTGCAAACTAA    942
                     ||||||||||||||||||||||||||||||||||||||||||
BSU09090___yh    901 CTTGCTTTCGGAATCTTCATGAAGCGGGATATTGCAAACTAA    942


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