Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01581 and BSU09140

See Amino acid alignment / Visit BSNT_01581 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:31
# Commandline: needle
#    -asequence dna-align/BSNT_01581___yhcM.1.22522.seq
#    -bsequence dna-align/BSU09140___yhcM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01581___yhcM-BSU09140___yhcM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01581___yhcM-BSU09140___yhcM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01581___yhcM
# 2: BSU09140___yhcM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     437/456 (95.8%)
# Similarity:   437/456 (95.8%)
# Gaps:           9/456 ( 2.0%)
# Score: 2121.5
# 
#
#=======================================

BSNT_01581___      1 ATGTTGTTCAACCAGCGAAGAGGAATCAGCCCCACAGCATTGATCATAGG     50
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU09140___yh      1 ATGTTGTTCAACCAGCGAAGAGGAATCAGCCCCGCAGCATTGATCATAGG     50

BSNT_01581___     51 ATCAACTATGCTTATTGCTGCATTATCACCTCAGATCCGCCACAGAATCA    100
                     ||||||||||||||||.|||||||||||||||||||||||||.|||||||
BSU09140___yh     51 ATCAACTATGCTTATTACTGCATTATCACCTCAGATCCGCCAAAGAATCA    100

BSNT_01581___    101 GCGGGTTTATCACAGGACAAATGAACAGACGAAATTCAGAAAATAACACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09140___yh    101 GCGGGTTTATCACAGGACAAATGAACAGACGAAATTCAGAAAATAACACG    150

BSNT_01581___    151 TTTGATGCTTCTAATGTAGGAAACATAGTCAAACAAGCATTTAGCG----    196
                     ||||||||||||||||||||||||||.|||||||||||||||||||    
BSU09140___yh    151 TTTGATGCTTCTAATGTAGGAAACATGGTCAAACAAGCATTTAGCGGAAG    200

BSNT_01581___    197 --GCG---GCAGCGGTGATAACCAGGACCGTTCGCAGAATCAAAGCCAGC    241
                       |||   |||||||||||||||||||||||||||||.||||||||||||
BSU09140___yh    201 CAGCGGAAGCAGCGGTGATAACCAGGACCGTTCGCAGCATCAAAGCCAGC    250

BSNT_01581___    242 GGCAAAATGGCCGTCAGCACCAGCACGCAGGACAGCAGCAACCACAGCAT    291
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU09140___yh    251 GGCAAAATGGCCGTCAGCACCAGCACGCTGGACAGCAGCAACCACAGCAT    300

BSNT_01581___    292 CAGCATACACAGTCTCAAACTAGGCAAACTGAGACTGCCGCGAAAAAAAG    341
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09140___yh    301 CAGCATACACAGTCTCAAACTAGGCAAACTGAGACAGCCGCGAAAAAAAG    350

BSNT_01581___    342 ACAGCCGCATTATGCTGAACCCATTCATTTTGAACAAAGCGCAATGAATG    391
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU09140___yh    351 ACAGCCGCATTATGCTGAACCCATTCATTTTGAACAAAACGCAATGAATG    400

BSNT_01581___    392 TCATGGACGACAACACGATGATGGAAATGCTGGAGGACTTAGAACCCGGC    441
                     |||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU09140___yh    401 TCATGGACGACAACACGATGATGGAAATGCTGGAGGACTTAGAGCCTGGC    450

BSNT_01581___    442 CGTTAA    447
                     ||||||
BSU09140___yh    451 CGTTAA    456


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