Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01631 and BSU09470

See Amino acid alignment / Visit BSNT_01631 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:38
# Commandline: needle
#    -asequence dna-align/BSNT_01631___yhdH.1.22522.seq
#    -bsequence dna-align/BSU09470___yhdH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01631___yhdH-BSU09470___yhdH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01631___yhdH-BSU09470___yhdH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01631___yhdH
# 2: BSU09470___yhdH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity:    1348/1356 (99.4%)
# Similarity:  1348/1356 (99.4%)
# Gaps:           0/1356 ( 0.0%)
# Score: 6708.0
# 
#
#=======================================

BSNT_01631___      1 TTGTCTGAGCAAAAAACAGTCCAATGGGCTTCGAAAATTGGTTTCGTCAT     50
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU09470___yh      1 TTGTCTGAGCAAAAACCAGTCCAATGGGCTTCGAAAATTGGTTTCGTCAT     50

BSNT_01631___     51 GGCAGCGGCCGGCTCGGCTATCGGCTTGGGCGCGATTTGGAAGTTCCCTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh     51 GGCAGCGGCCGGCTCGGCTATCGGCTTGGGCGCGATTTGGAAGTTCCCTT    100

BSNT_01631___    101 ACGTAGCGGGGACCAATGGGGGAGGAGCCTTTTTTCTTATCTTCGTGTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    101 ACGTAGCGGGGACCAATGGGGGAGGAGCCTTTTTTCTTATCTTCGTGTTA    150

BSNT_01631___    151 TTTACCATCCTCTTAGGCTATCCGCTTTTGGTGGGGGAATTTATTTTTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    151 TTTACCATCCTCTTAGGCTATCCGCTTTTGGTGGGGGAATTTATTTTTGG    200

BSNT_01631___    201 AAGACGGAACCAGACGAATGCCATTGATGCATATAAAAAAGAAGCGCCGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    201 AAGACGGAACCAGACGAATGCCATTGATGCATATAAAAAAGAAGCGCCGC    250

BSNT_01631___    251 GATCAGCTTGGTTTCTTACGGGGTGGATCGGCGTAGCCGCGTGTTTCTTA    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU09470___yh    251 GATCAGCTTGGTTTCTTACGGGGTGGATCGGCGTAGCGGCGTGTTTCTTA    300

BSNT_01631___    301 GTGCTGTCGTTTTACAGTGTAATCGGGGGATGGATTTTGCTGTATATCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    301 GTGCTGTCGTTTTACAGTGTAATCGGGGGATGGATTTTGCTGTATATCGT    350

BSNT_01631___    351 AAAAACAGCGTCAGGATCACTGTCCGGGCTTTCTCAAGCACAGTATGGCG    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    351 GAAAACAGCGTCAGGATCACTGTCCGGGCTTTCTCAAGCACAGTATGGCG    400

BSNT_01631___    401 CTCTTTTTGCTTCTATTATCCAAAATCCGGTGCAGACGCTCGCGGCTCAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    401 CTCTTTTTGCTTCTATTATCCAAAATCCGGTGCAGACGCTCGCGGCTCAG    450

BSNT_01631___    451 CTTGTCTTTATGGCACTGACTGTACTCGTTGTCGCAAGAGGGGTTCAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    451 CTTGTCTTTATGGCACTGACTGTACTCGTTGTCGCAAGAGGGGTTCAAAA    500

BSNT_01631___    501 AGGGATTGAACGGGTAAGCGCGGTGATGATGCCGATTTTGTTTTTATTGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    501 AGGGATTGAACGGGTAAGCGCGGTGATGATGCCGATTTTGTTTTTATTGT    550

BSNT_01631___    551 TTATTCTGCTCGTTCTTCGGTCTCTTACGCTTAATGGTGCAATGGAAGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    551 TTATTCTGCTCGTTCTTCGGTCTCTTACGCTTAATGGTGCAATGGAAGGC    600

BSNT_01631___    601 GTAAAGTTTCTGCTTGTGCCTCATTTCGGCGATTTGACTCCGGAATCCAT    650
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU09470___yh    601 GTAAAGTTTCTGCTTGTGCCTCATTTCGGCGATCTGACTCCGGAATCCAT    650

BSNT_01631___    651 ATTATTCGGGCTGGGACAGGCCTTCTTTACGTTAACACTGGGGGTTTCGG    700
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    651 ATTATTCGCGCTGGGACAGGCCTTCTTTACGTTAACACTGGGGGTTTCGG    700

BSNT_01631___    701 TGATGGTGACCTACAGCTCCTATTTGCCGAAAACACAAAATATCCCTCGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    701 TGATGGTGACCTACAGCTCCTATTTGCCGAAAACACAAAATATCCCTCGT    750

BSNT_01631___    751 TCGGCAGCCTCCATTGTCTTGATGAATATCATTGTGACACTCTTGGCAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    751 TCGGCAGCCTCCATTGTCTTGATGAATATCATTGTGACACTCTTGGCAGG    800

BSNT_01631___    801 TTTGGCTATTTTTCCGGCGGTTTTCTCATTCGGTTTTCAGCCAAATGAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    801 TTTGGCTATTTTTCCGGCGGTTTTCTCATTCGGTTTTCAGCCAAATGAAG    850

BSNT_01631___    851 GACCGACATTGCTGTTTACAGTGCTTCCGGCCGTTTTTGAACAGCTTCCG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    851 GACCGACATTGCTGTTTACAGTGCTTCCGGCCGTTTTTGAACAGCTTCCG    900

BSNT_01631___    901 TTCGGCACGTTGTTTTTTATCGGCTTTCTCGTTGCATTTTTATTTGCAGC    950
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    901 TTCGGCACATTGTTTTTTATCGGCTTTCTCGTTGCATTTTTATTTGCAGC    950

BSNT_01631___    951 CTTAACCTCAGCATTTTCGATGGTTGAAATTATCGTTGCCACAATCGGAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh    951 CTTAACCTCAGCATTTTCGATGGTTGAAATTATCGTTGCCACAATCGGAA   1000

BSNT_01631___   1001 AAGGGGATGAAAAGAAGAGAAAAAAACTGTCATGGACGAGCGGGCTTTTG   1050
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1001 AAGGGGACGAAAAGAAGAGAAAAAAACTGTCATGGACGAGCGGGCTTTTG   1050

BSNT_01631___   1051 ATCTTTTTGGTCGGAATCCCATGCTGCTTGTCTTATGGTGTTTTGAGTGA   1100
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU09470___yh   1051 ATCTTTTTGGTCGGAATCCCATGCTGCTTGTCTTATGGCGTTTTGAGTGA   1100

BSNT_01631___   1101 TGTGCACCTATTTGGCAAAACGTTTTTTGATATTGCCGATTTTACCGTCA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1101 TGTGCACCTATTTGGCAAAACGTTTTTTGATATTGCCGATTTTACCGTCA   1150

BSNT_01631___   1151 GCAATGTTTTGATGCCTTCAGGCGCTCTGTTAATTTCTCTATTTATCCCG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1151 GCAATGTTTTGATGCCTTCAGGCGCTCTGTTAATTTCTCTATTTATCCCG   1200

BSNT_01631___   1201 CTGAAAATTTCGAAAAGCGAACTCTTGGCTGAAATGCGAAATGGATCAAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1201 CTGAAAATTTCGAAAAGCGAACTCTTGGCTGAAATGCGAAATGGATCAAA   1250

BSNT_01631___   1251 TGCAGGTAAAGCATTCTTTTACACATGGTTTTATTTGCTTCGTTTTATCG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1251 TGCAGGTAAAGCATTCTTTTACACATGGTTTTATTTGCTTCGTTTTATCG   1300

BSNT_01631___   1301 TGCCGCTTGCCATTATTATCGTGTTCTTAAATTTAATCGGAATTTTATCA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09470___yh   1301 TGCCGCTTGCCATTATTATCGTGTTCTTAAATTTAATCGGAATTTTATCA   1350

BSNT_01631___   1351 TTTTAA   1356
                     ||||||
BSU09470___yh   1351 TTTTAA   1356


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