Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01640 and BSU09540

See Amino acid alignment / Visit BSNT_01640 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:39
# Commandline: needle
#    -asequence dna-align/BSNT_01640___yhdO.1.22522.seq
#    -bsequence dna-align/BSU09540___plsC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01640___yhdO-BSU09540___plsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01640___yhdO-BSU09540___plsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01640___yhdO
# 2: BSU09540___plsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     599/600 (99.8%)
# Similarity:   599/600 (99.8%)
# Gaps:           0/600 ( 0.0%)
# Score: 2991.0
# 
#
#=======================================

BSNT_01640___      1 ATGTATAAGTTTTGTGCAAATGCTTTAAAAGTTATTCTTTCTCTTCGCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl      1 ATGTATAAGTTTTGTGCAAATGCTTTAAAAGTTATTCTTTCTCTTCGCGG     50

BSNT_01640___     51 AGGAGTGAAGGTGTATAACAAAGAAAACCTTCCGGCCGATTCAGGTTTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl     51 AGGAGTGAAGGTGTATAACAAAGAAAACCTTCCGGCCGATTCAGGTTTTG    100

BSNT_01640___    101 TCATCGCGTGTACACATTCCGGCTGGGTTGATGTGATTACACTCGGAGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    101 TCATCGCGTGTACACATTCCGGCTGGGTTGATGTGATTACACTCGGAGTC    150

BSNT_01640___    151 GGGATTCTTCCTTATCAAATACACTACATGGCGAAAAAAGAGCTTTTTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    151 GGGATTCTTCCTTATCAAATACACTACATGGCGAAAAAAGAGCTTTTTCA    200

BSNT_01640___    201 AAATAAATGGATCGGTTCGTTTCTGAAGAAAATTCATGCTTTTCCGGTAG    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU09540___pl    201 AAATAAATGGATCGGTTCGTTTCTGAAGAAAATTCATGCCTTTCCGGTAG    250

BSNT_01640___    251 ATCGGGAAAATCCCGGGCCAAGCAGTATTAAAACGCCGATTAAGCTGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    251 ATCGGGAAAATCCCGGGCCAAGCAGTATTAAAACGCCGATTAAGCTGCTG    300

BSNT_01640___    301 AAAGAAGGAGAGATCGTCGGTATCTTCCCAAGCGGAACAAGAACCTCTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    301 AAAGAAGGAGAGATCGTCGGTATCTTCCCAAGCGGAACAAGAACCTCTGA    350

BSNT_01640___    351 GGATGTGCCTTTGAAAAGAGGTGCGGTGACGATTGCGCAAATGGGGAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    351 GGATGTGCCTTTGAAAAGAGGTGCGGTGACGATTGCGCAAATGGGGAAAG    400

BSNT_01640___    401 CGCCGCTTGTCCCCGCTGCATATCAGGGCCCTTCAAGCGGAAAAGAATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    401 CGCCGCTTGTCCCCGCTGCATATCAGGGCCCTTCAAGCGGAAAAGAATTA    450

BSNT_01640___    451 TTCAAAAAAGGAAAAATGAAGCTGATTATCGGTGAGCCTCTTCACCAGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    451 TTCAAAAAAGGAAAAATGAAGCTGATTATCGGTGAGCCTCTTCACCAGGC    500

BSNT_01640___    501 TGATTTTGCCCACCTGCCTTCAAAGGAAAGACTTGCAGCAATGACAGAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    501 TGATTTTGCCCACCTGCCTTCAAAGGAAAGACTTGCAGCAATGACAGAGG    550

BSNT_01640___    551 CTTTGAATCAGCGGATTAAAGAACTAGAGAATAAACTTGATCAGCTATAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09540___pl    551 CTTTGAATCAGCGGATTAAAGAACTAGAGAATAAACTTGATCAGCTATAA    600


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