Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01642 and BSU09560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:40
# Commandline: needle
# -asequence dna-align/BSNT_01642.1.22522.seq
# -bsequence dna-align/BSU09560___cueR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01642-BSU09560___cueR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01642-BSU09560___cueR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: BSU09560___cueR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity: 432/546 (79.1%)
# Similarity: 432/546 (79.1%)
# Gaps: 114/546 (20.9%)
# Score: 2160.0
#
#
#=======================================
BSNT_01642 1 ATGTTACTTCAATCAGATGATGAATTCCACAACTTCCAATTCCGGTCTGA 50
BSU09560___cu 0 -------------------------------------------------- 0
BSNT_01642 51 AAAAAACAATAAACTTGTGCAAGACACCGTTCATATATTAAACTATTCTC 100
BSU09560___cu 0 -------------------------------------------------- 0
BSNT_01642 101 ATAACTATAACGTGATGGTTGGGAGGGATATAGATGGGGCTGAGACTTAT 150
||||||||||||||||||||||||||||||||||||
BSU09560___cu 1 --------------ATGGTTGGGAGGGATATAGATGGGGCTGAGACTTAT 36
BSNT_01642 151 CGCATCAGTGAACTAGCGGCACTCGCCGGAGTAACGAAACGGACAGTTGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 37 CGCATCAGTGAACTAGCGGCACTCGCCGGAGTAACGAAACGGACAGTTGA 86
BSNT_01642 201 TTATTATACGAATCTCGGTCTGCTTACGCCGGCCAGATCCTGTTCAAATT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 87 TTATTATACGAATCTCGGTCTGCTTACGCCGGCCAGATCCTGTTCAAATT 136
BSNT_01642 251 ACCGTTACTACGACGAAAATGCACTCAAACGACTTATATTTATTGTAGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 137 ACCGTTACTACGACGAAAATGCACTCAAACGACTTATATTTATTGTAGAT 186
BSNT_01642 301 TGCAAGAAGCAGCGATTGGCCCTGTCCGATATTAAAGATCGACTGGAGAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 187 TGCAAGAAGCAGCGATTGGCCCTGTCCGATATTAAAGATCGACTGGAGAA 236
BSNT_01642 351 CCAGTTTCCCTCTTCAGCTAAACTTGATGATGAAATTGGAAATCTGGCAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 237 CCAGTTTCCCTCTTCAGCTAAACTTGATGATGAAATTGGAAATCTGGCAT 286
BSNT_01642 401 TAGAAATTGATCATATGAATCAAAACATCTCCGGAATCTTGCATCGGTTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 287 TAGAAATTGATCATATGAATCAAAACATCTCCGGAATCTTGCATCGGTTT 336
BSNT_01642 451 GAACGGCTGAAGCCCGAGGATCGTGACAAGCTGAAAAGCAAACTCCCGCC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 337 GAACGGCTGAAGCCCGAGGATCGTGACAAGCTGAAAAGCAAACTCCCGCC 386
BSNT_01642 501 TGAAAAGCTCGCCGTGTTCCAATCATTTATGCTGCTGTTAAGTTAA 546
||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu 387 TGAAAAGCTCGCCGTGTTCCAATCATTTATGCTGCTGTTAAGTTAA 432
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