Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01687 and BSU09880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:45
# Commandline: needle
# -asequence dna-align/BSNT_01687___yhaR.1.22522.seq
# -bsequence dna-align/BSU09880___yhaR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01687___yhaR-BSU09880___yhaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01687___yhaR-BSU09880___yhaR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01687___yhaR
# 2: BSU09880___yhaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity: 757/816 (92.8%)
# Similarity: 757/816 (92.8%)
# Gaps: 48/816 ( 5.9%)
# Score: 3741.0
#
#
#=======================================
BSNT_01687___ 1 ATGTATAGGAGAAAGAAAAAAGAAAGCGTATACTTGGAGGTGCTTCATAT 50
||
BSU09880___yh 1 ------------------------------------------------AT 2
BSNT_01687___ 51 GGAGTTTGTTCAATATGCATGTAATGGGGCCGTTGCAGAGATTATCCTGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 3 GGAGTTTGTTCAATATGCATGTAATGGGGCCGTTGCAGAGATTATCCTGA 52
BSNT_01687___ 101 ATCGGCCTGATGCCCATCACGCCCTGAATGAACAGTTGCTGTCTGAATTG 150
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09880___yh 53 ATCGGCCTGATGCCCATCACGCCCTGAATGAACAGATGCTGTCTGAATTG 102
BSNT_01687___ 151 AAGGAGGCAGTCGAAATGGCGGCTGCAAGCGAGGCGCTCATCGTTCTTCT 200
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU09880___yh 103 AAGGAGGCAGTCGAAATGGCGGCTGCAAGCGAGGCGCTCATCGTTCTCCT 152
BSNT_01687___ 201 GAGAGGAAGCGGGAAAGGCTTTTCGGCCGGTGGTGATATCAGAATGATGA 250
||||||||||||||||||||||||||||||.|||||||||||.|||||||
BSU09880___yh 153 GAGAGGAAGCGGGAAAGGCTTTTCGGCCGGCGGTGATATCAGGATGATGA 202
BSNT_01687___ 251 CGTCAGAGCATGACCCTGATCAATTTAAACGGCTGATGGATACGATTGAG 300
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU09880___yh 203 CGTCAGAGCATGACCCTGACCAATTTAAACGGCTGATGGATACGATTGAG 252
BSNT_01687___ 301 GCTGTCACCTTGAATTTATATCAGATGAAGAAAGTGACAATTGCAGCCAT 350
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 253 GCTGTCACCCTGAATTTATATCAGATGAAGAAAGTGACAATTGCAGCCAT 302
BSNT_01687___ 351 TCATGGTGCTGCTGCGGGACTGGGCCTGAGTTTGGCGCTTTGTGCGGACA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 303 TCATGGTGCTGCTGCGGGACTGGGCCTGAGTTTGGCGCTTTGTGCGGACA 352
BSNT_01687___ 401 TTGTGCTCGCTGAAAAAAACGCCGTCCTCGCGATGAATTTTATCGGCATT 450
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU09880___yh 353 TTGTGCTCGCTGAAAAAAACGCCGTTCTCGCGATGAATTTTATCGGCATT 402
BSNT_01687___ 451 GGGCTTGTTCCGGACGGCGGAGGACATTATTTGCTGAAAAAAAGAATCGG 500
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU09880___yh 403 GGGCTTGTTCCGGACGGCGGAGGACATTATTTGCTGAAGAAAAGAATCGG 452
BSNT_01687___ 501 TGAAGCAAAAGCGAAAAAACTGATTTGGAGCGGAAAAAAACTATCTGCCT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 453 TGAAGCAAAAGCGAAAAAACTGATTTGGAGCGGAAAAAAACTATCTGCCT 502
BSNT_01687___ 551 CAGAAGCTGCCGATATGGGGCTTCTTGATGGGACATTTGCCGGAGACCCT 600
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 503 CGGAAGCTGCCGATATGGGGCTTCTTGATGGGACATTTGCCGGAGACCCT 552
BSNT_01687___ 601 GCCGAAGGCGCAAGACCCATTATCGAAACCCTGTTGGCCTCCCCTCTTTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 553 GCCGAAGGCGCAAGACCCATTATCGAAACCCTGTTGGCCTCCCCTCTTTT 602
BSNT_01687___ 651 GGCGATGATCGAAACGAAAGCTATTTTTCAAAGCCTCCAGATTGAAGAAC 700
||||||||||||||||||||.||||||||||||||||||.||||||||||
BSU09880___yh 603 GGCGATGATCGAAACGAAAGGTATTTTTCAAAGCCTCCAAATTGAAGAAC 652
BSNT_01687___ 701 TGAAAAAAGTGCTATCCCTTGAGCGCAGCGCCCAAGAGAGAATGAGAAGG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 653 TGAAAAAAGTGCTATCCCTTGAGCGCAGCGCCCAAGAGAGAATGAGAAGG 702
BSNT_01687___ 751 ACCAAGGATCACCAAGAAGGAATCCGTGCCTTTTTAGAAAAACGGGAGCC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh 703 ACCAAGGATCACCAAGAAGGAATCCGTGCCTTTTTAGAAAAACGGGAGCC 752
BSNT_01687___ 801 GAAGTTTCAAGCGTAA 816
||||||||||||||||
BSU09880___yh 753 GAAGTTTCAAGCGTAA 768
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