Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01706 and BSU10000

See Amino acid alignment / Visit BSNT_01706 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:47
# Commandline: needle
#    -asequence dna-align/BSNT_01706.1.22522.seq
#    -bsequence dna-align/BSU10000___yhaH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01706-BSU10000___yhaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01706-BSU10000___yhaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01706
# 2: BSU10000___yhaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity:     356/402 (88.6%)
# Similarity:   356/402 (88.6%)
# Gaps:          45/402 (11.2%)
# Score: 1776.0
# 
#
#=======================================

BSNT_01706         1 ATGCTGAATGAATCCTATTTTGAAGAAAAAGACGGGGTGATTGTAATGGC     50
                                                                  |||||
BSU10000___yh      1 ---------------------------------------------ATGGC      5

BSNT_01706        51 GAGCGGACGTTCTCTATTAACAGGACTATTCGTAGGCGGCATCATCGGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh      6 GAGCGGACGTTCTCTATTAACAGGACTATTCGTAGGCGGCATCATCGGAG     55

BSNT_01706       101 GAGCAGCGGTTCTTCTTACTGCACCTTCCTCAGGAAAGCAGCTGCGTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh     56 GAGCAGCGGTTCTTCTTACTGCACCTTCCTCAGGAAAGCAGCTGCGTGAA    105

BSNT_01706       151 AAAATGAAAACCAATTATGATTCTTTTGAAGAAACAATCAAACGCTTAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh    106 AAAATGAAAACCAATTATGATTCTTTTGAAGAAACAATCAAACGCTTAAA    155

BSNT_01706       201 GTCAGACGGGCTTGCATTAAAAGACCAGCTGATCAAAGCGGCAAAAGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh    156 GTCAGACGGGCTTGCATTAAAAGACCAGCTGATCAAAGCGGCAAAAGAAA    205

BSNT_01706       251 GCACGGATGTTATTAAAGACGTGGGCGGCGAGCTCCAAACGTCAATTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU10000___yh    206 GCACGGATGTTATTAAAGACGTGGGCGGCGAGCTCCAAACATCAATTAAA    255

BSNT_01706       301 AAATGGCAGGAAGAGATCAAGCCTCACCAGCAGGATCTGCAAAAAGAAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh    256 AAATGGCAGGAAGAGATCAAGCCTCACCAGCAGGATCTGCAAAAAGAAAT    305

BSNT_01706       351 TGCCGATATCGAAGAGAAAATCAGACAGCTGGAGAAAACCTTACAAAACT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10000___yh    306 TGCCGATATCGAAGAGAAAATCAGACAGCTGGAGAAAACCTTACAAAACT    355

BSNT_01706       401 AA    402
                     ||
BSU10000___yh    356 AA    357


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