Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01722 and BSU10090

See Amino acid alignment / Visit BSNT_01722 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:49
# Commandline: needle
#    -asequence dna-align/BSNT_01722___yhgB.1.22522.seq
#    -bsequence dna-align/BSU10090___yhgB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01722___yhgB-BSU10090___yhgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01722___yhgB-BSU10090___yhgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01722___yhgB
# 2: BSU10090___yhgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     311/318 (97.8%)
# Similarity:   311/318 (97.8%)
# Gaps:           3/318 ( 0.9%)
# Score: 1518.5
# 
#
#=======================================

BSNT_01722___      1 ATGAAGCATACTTGCCCAGTCTGCGGGTTTAAGGGATTGGCTGAACCGCC     50
                     |||||||||||||||||||||||||||||||| |||||||||||||||||
BSU10090___yh      1 ATGAAGCATACTTGCCCAGTCTGCGGGTTTAA-GGATTGGCTGAACCGCC     49

BSNT_01722___     51 ATATGATCATGAAGGCAATCATTCTCATGAAATCTGCCCGTGCTGCGGTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10090___yh     50 ATATGATCATGAAGGCAATCATTCTCATGAAATCTGCCCGTGCTGCGGTT     99

BSNT_01722___    101 TTCAGTTCGGATTTGATGATTACGAGATGCAGCACGAGGATGATTCATAT    150
                     |||||||||||||||||||.|||||||||||||||||||||.|.||||| 
BSU10090___yh    100 TTCAGTTCGGATTTGATGAGTACGAGATGCAGCACGAGGATAACTCATA-    148

BSNT_01722___    151 TTAGAGCCATCGGAAAGCATCATCGCCTATAGAAAAAACTGGCTTGCTGA    200
                      |||||||||||||||||||||||||||||||||||||||||||||||||
BSU10090___yh    149 -TAGAGCCATCGGAAAGCATCATCGCCTATAGAAAAAACTGGCTTGCTGA    197

BSNT_01722___    201 AGGGTGCGTCATTTTTTCTCCTGAATGCTTCCCAAAACATCTGCAAAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10090___yh    198 AGGGTGCGTCATTTTTTCTCCTGAATGCTTCCCAAAACATCTGCAAAAAG    247

BSNT_01722___    251 CGAATAGAGTATTAAGGCATCATCTGATTGAGCAGCTGAAACAGATCAAT    300
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU10090___yh    248 CGAATAGAGGATTAAGGCATCATCTGATTGAGCAGCTGAAACAGATCAAT    297

BSNT_01722___    301 GTTCATCTTCCATCATAA    318
                     ||||||||||||||||||
BSU10090___yh    298 GTTCATCTTCCATCATAA    315


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