Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01776 and BSU10470

See Amino acid alignment / Visit BSNT_01776 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:56
# Commandline: needle
#    -asequence dna-align/BSNT_01776___yhjD.1.22522.seq
#    -bsequence dna-align/BSU10470___yhjD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01776___yhjD-BSU10470___yhjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01776___yhjD-BSU10470___yhjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01776___yhjD
# 2: BSU10470___yhjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity:     359/372 (96.5%)
# Similarity:   359/372 (96.5%)
# Gaps:           9/372 ( 2.4%)
# Score: 1779.0
# 
#
#=======================================

BSNT_01776___      1 ATGCCAAATCTGCAGGAGGAAATATACGATTTAATTGAACGGGCTCTCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh      1 ATGCCAAATCTGCAGGAGGAAATATACGATTTAATTGAACGGGCTCTCTT     50

BSNT_01776___     51 TTTGCCCATGGCCATTACGATTTTTAACCGTGATCTCGCCGGAATTGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh     51 TTTGCCCATGGCCATTACGATTTTTAACCGTGATCTCGCCGGAATTGAAG    100

BSNT_01776___    101 AAAGCACATTAAAATTGAAGCATCCTTATAAACAGCTTATCAGCGAATCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh    101 AAAGCACATTAAAATTGAAGCATCCTTATAAACAGCTTATCAGCGAATCA    150

BSNT_01776___    151 TTAAAAATAGCACAAAAGGATTTGATGGAGGTCAGAAAAGAACTGAGGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh    151 TTAAAAATAGCACAAAAGGATTTGATGGAGGTCAGAAAAGAACTGAGGAA    200

BSNT_01776___    201 AAGAAAAATTGCAATCCGCGAGACGGAACGCGATGAAGCCTTTACGCTCT    250
                     ||||||||||||||||||||||||||||||||||||.||||||||.||||
BSU10470___yh    201 AAGAAAAATTGCAATCCGCGAGACGGAACGCGATGAGGCCTTTACACTCT    250

BSNT_01776___    251 ATACATTTGTCATCGACGGTTATGAAGAAAACCATCGCTATTTTAATCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh    251 ATACATTTGTCATCGACGGTTATGAAGAAAACCATCGCTATTTTAATCCG    300

BSNT_01776___    301 CGAATCCGTGAGCAGGTCAGCGAATTATTAACATACTATCTATTTGCCCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10470___yh    301 CGAATCCGTGAGCAGGTCAGCGAATTATTAACATACTATCTATTTGCCCC    350

BSNT_01776___    351 GGACAGACTCCGAGCCTTTTGA    372
                     .|||||||||.||         
BSU10470___yh    351 AGACAGACTCTGA---------    363


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