Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01821 and BSU10690

See Amino acid alignment / Visit BSNT_01821 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:04
# Commandline: needle
#    -asequence dna-align/BSNT_01821___gerPD.1.22522.seq
#    -bsequence dna-align/BSU10690___gerPD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01821___gerPD-BSU10690___gerPD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01821___gerPD-BSU10690___gerPD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01821___gerPD
# 2: BSU10690___gerPD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     172/177 (97.2%)
# Similarity:   172/177 (97.2%)
# Gaps:           0/177 ( 0.0%)
# Score: 840.0
# 
#
#=======================================

BSNT_01821___      1 ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGACATCCGGAT     50
                     |||||||||||||||||||||||||||||||||||||||||.||.|||||
BSU10690___ge      1 ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGATATTCGGAT     50

BSNT_01821___     51 GAACGGTGTGTCCAGTTCCTCCGTTTTCCACATCGGAGACACTGAATCCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10690___ge     51 GAACGGTGTGTCCAGTTCCTCCGTTTTCCACATCGGAGACACTGAATCCA    100

BSNT_01821___    101 TCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATCGGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU10690___ge    101 TCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATTGGG    150

BSNT_01821___    151 CCGTTTGTTCCGATTGCGCCAGAATAA    177
                     |||||||.||||.||||||||||||||
BSU10690___ge    151 CCGTTTGCTCCGCTTGCGCCAGAATAA    177


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