Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01838 and BSU10780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:06
# Commandline: needle
# -asequence dna-align/BSNT_01838___yisN.1.22522.seq
# -bsequence dna-align/BSU10780___yisN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01838___yisN-BSU10780___yisN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01838___yisN-BSU10780___yisN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01838___yisN
# 2: BSU10780___yisN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 589
# Identity: 540/589 (91.7%)
# Similarity: 540/589 (91.7%)
# Gaps: 32/589 ( 5.4%)
# Score: 2599.5
#
#
#=======================================
BSNT_01838___ 1 ------------------------ATGAAACGGAAACAATTGTTATATAC 26
||||||||||||||||||||||||||
BSU10780___yi 1 ATGAAGAAAAAGGAGACAGCATGGATGAAACGGAAACAATTGTTATATAC 50
BSNT_01838___ 27 AGAGGAACGAAAATGGGAATACGGCACCATCCTCATCGAAGACGGCGTCT 76
||||||||||||.|||||||||||||||||||||||.|||||||||.|||
BSU10780___yi 51 AGAGGAACGAAAGTGGGAATACGGCACCATCCTCATTGAAGACGGCATCT 100
BSNT_01838___ 77 GTTTAATCGAAAACGGAGAAGGTGATATACTTTTGGCGGACACTCTCCAA 126
|.||||||||||||||.|||||.||||||||..|||||||||.|||||||
BSU10780___yi 101 GCTTAATCGAAAACGGTGAAGGCGATATACTGCTGGCGGACAGTCTCCAA 150
BSNT_01838___ 127 CACAGCCCAATCTGGGTCCATCATAAAGGAAAGTGGGAGCAAGCCGGCTT 176
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU10780___yi 151 CACAGCCCAATCTGGATCCATCATAAAGGAAAGTGGGAGCAAGCCGGCTT 200
BSNT_01838___ 177 CCAGGATCAA-TTGGTTCTGGCATGCGGTGAAGAAAACATCTCCCTTTCC 225
.||||| ||| ||||||.||||||||||||.|||||||||||||||||||
BSU10780___yi 201 TCAGGA-CAAGTTGGTTTTGGCATGCGGTGCAGAAAACATCTCCCTTTCC 249
BSNT_01838___ 226 GGGGGAGAACGCATCCGCTATGAGAAATCAGTCAAGCGGCCGCTCATGGC 275
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU10780___yi 250 GGCGGAGAACGCATCCGCTATGAGAAATCAGTCAAGCGGCCGCTCATGGC 299
BSNT_01838___ 276 GCTTTTGGATTCGCTTGACGACGAAACCTTTCTCGCATTTCTGCAGCACT 325
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10780___yi 300 GCTTTTGGATTCGCTTGACGACGAAACCTTTCTCGCATTTCTGCAGCACT 349
BSNT_01838___ 326 TGCACAGCTTCGGCTTATCGGTATTCGATTGCGTCTTTTCTTATAATAAA 375
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10780___yi 350 TGCACAGCTTCGGCTTATCGGTATTCGATTGCGTCTTTTCTTATAATAAA 399
BSNT_01838___ 376 GGAGTCTTTTCGAATACTTCGGCGGGGCAGGGTGTGTCCTTTTATCACTT 425
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10780___yi 400 GGAGTCTTTTCGAATACTTCGGCGGGGCAGGGTGTGTCCTTTTATCACTT 449
BSNT_01838___ 426 TTCAAATGACACCGCACAATGCGCGATGCAGCATC------ACTACAGCA 469
||||||||||||||||||||||||||||||||||| |||||||||
BSU10780___yi 450 TTCAAATGACACCGCACAATGCGCGATGCAGCATCACTACAACTACAGCA 499
BSNT_01838___ 470 ACGAAGGGACAGGAGACCGTTTTGAATGGACGGCTTCAAACGGAAAGCGA 519
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU10780___yi 500 GCGAAGGGACAGGAGACCGTTTTGAATGGACGGCTTCAAACGGAAAGCGA 549
BSNT_01838___ 520 TCCATTATGTATTCAGCAGTCCAACGGGGGCGCAAATAA 558
|||||||||||..||||||||||||||||||||||||||
BSU10780___yi 550 TCCATTATGTACACAGCAGTCCAACGGGGGCGCAAATAA 588
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