Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01842 and BSU10810

See Amino acid alignment / Visit BSNT_01842 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:06
# Commandline: needle
#    -asequence dna-align/BSNT_01842___yisP.1.22522.seq
#    -bsequence dna-align/BSU10810___yisP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01842___yisP-BSU10810___yisP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01842___yisP-BSU10810___yisP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01842___yisP
# 2: BSU10810___yisP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 838
# Identity:     676/838 (80.7%)
# Similarity:   676/838 (80.7%)
# Gaps:          44/838 ( 5.3%)
# Score: 2792.0
# 
#
#=======================================

BSNT_01842___      1 ---------------------ATGAAAGAGATAAAAGAAGCCTATCAGCA     29
                                          ||||||||||||||||||||.||.|||||
BSU10810___yi      1 GTGATACATAGGAGTGAGAAAATGAAAGAGATAAAAGAAGCTTACCAGCA     50

BSNT_01842___     30 ATGCGGCCAGATCGTCAGCG--CCCGCGAACCAGCCTGTTACAAAGCATT     77
                     ||||||.|||||.||..|||  ..||||  ||||||||||.|||||||||
BSU10810___yi     51 ATGCGGACAGATTGTTGGCGAATACGCG--CCAGCCTGTTTCAAAGCATT     98

BSNT_01842___     78 TTCGTTTCTTCCGCTGAAGCAAAGGCAGGCAGCTTGGGCGGTTATGGCGT    127
                     .||.|.|||.|||||.||||||||.||.||..|||||||.||..||.|||
BSU10810___yi     99 ATCATATCTCCCGCTAAAGCAAAGACAAGCCTCTTGGGCAGTATTGTCGT    148

BSNT_01842___    128 TTTGCCATACGGCAGCCAATGCGGATGAGAAGGCGTTATCTGCC----AT    173
                     |||||||.|||||.||||.|||.||.||.||||   ||| ||||    .|
BSU10810___yi    149 TTTGCCACACGGCGGCCAGTGCAGACGAAAAGG---TAT-TGCCCGCATT    194

BSNT_01842___    174 TGAAGCGGAGGCGGAAGATGTTTTTTCC---GGTACGTATAACGGGAATC    220
                     ||||||..|.||.||..|||  |||.||   || ||..|||||||.||.|
BSU10810___yi    195 TGAAGCTAAAGCTGATCATG--TTTACCAAAGG-ACAAATAACGGTAAAC    241

BSNT_01842___    221 ATTTTTTGTGGAAGGCTTTCGGCCATGCGTACCAAACCTTTACACTGGAC    270
                     |...|.|.|||||||||||.|..||||||||.|..|||||||||.||||.
BSU10810___yi    242 AACATCTATGGAAGGCTTTTGATCATGCGTATCGGACCTTTACATTGGAA    291

BSNT_01842___    271 AGCAAGCCATTCCGTGAGTTCATTGCCGCACAGAAAGCGGAAGATAAACC    320
                     |||.|.||.||.||.|||||.|||||||||||.||||..||.|..||.||
BSU10810___yi    292 AGCGAACCTTTTCGGGAGTTTATTGCCGCACAAAAAGAAGACGCCAAGCC    341

BSNT_01842___    321 GTTTGGAAACCTTGATGAATTGCTCATGCACGCATACCAGACAGGCGGCG    370
                     ||.||...|||||||||||.||||||||.|||||||.|.|||.|||||.|
BSU10810___yi    342 GTATGATGACCTTGATGAACTGCTCATGTACGCATATCGGACGGGCGGTG    391

BSNT_01842___    371 CAGCCGGATTGATGCTGCTCCCGATTATGGCGCGCCGGCATCAGGAACAG    420
                     |.|||||||||||||||||.|||||..||.|.|||||..|.||.||.|||
BSU10810___yi    392 CTGCCGGATTGATGCTGCTGCCGATACTGACACGCCGAAAACAAGATCAG    441

BSNT_01842___    421 CTGACACATGCAGCCGGTTCTCTCGGTTTAGCGATTCAGCTGATTCGGAT    470
                     ||.|.|||.|||||||..||||||||.||.||.||.||||||.||| |.|
BSU10810___yi    442 CTCAAACAAGCAGCCGTCTCTCTCGGCTTGGCCATACAGCTGGTTC-GCT    490

BSNT_01842___    471 TC-TGAGAGATATCGGCACTGGCCAACAGCAAAAAAGCCGTATCCCTCGG    519
                     || |.||.|||.|.|||||.|   |.||||||||||.|||.||.||.||.
BSU10810___yi    491 TCTTAAGTGATCTTGGCACAG---ATCAGCAAAAAAACCGCATTCCCCGT    537

BSNT_01842___    520 GAAGTAATGCAGCAATTCGGCTATACAGAGGCTGATCTCCAAAAAGGCAC    569
                     .|.|||||||||||||||||||||||||||||||||||||||||||||||
BSU10810___yi    538 CAGGTAATGCAGCAATTCGGCTATACAGAGGCTGATCTCCAAAAAGGCAC    587

BSNT_01842___    570 CGTAAATAAGGCGTTCACAATGACGTGGGAGTATATCGCTTTTGAAGCGG    619
                     |||||||||.||||||||||||||||||||||||||||||||||||||.|
BSU10810___yi    588 CGTAAATAAAGCGTTCACAATGACGTGGGAGTATATCGCTTTTGAAGCAG    637

BSNT_01842___    620 AAGCCTACCTTGAAGAGTGTCAGGATGCCTTGCCGCTATTTCCGCAGTAT    669
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10810___yi    638 AAGCCTACCTTGAAGAGTGTCAGGATGCCTTGCCGCTATTTCCGCAGTAT    687

BSNT_01842___    670 TCTCAAAAAACGGTGAAAGCTGCTCTTCATTTGTACCGGGCTGTTTTAGA    719
                     ||||||||||||||||||||.||||||||||||.||||||||||||||||
BSU10810___yi    688 TCTCAAAAAACGGTGAAAGCCGCTCTTCATTTGCACCGGGCTGTTTTAGA    737

BSNT_01842___    720 AAAAATCCGGGCGAAGCAGCACGATGTATTTCAACTTCACTTCGCTCTCA    769
                     ||||||||||||||||||||||||||||||||||..||||||||||||||
BSU10810___yi    738 AAAAATCCGGGCGAAGCAGCACGATGTATTTCAATATCACTTCGCTCTCA    787

BSNT_01842___    770 CAGAGACCGAAGTGAAGCAGATTCTCTCTGATATCTAA    807
                     |||||||||||||||||||||||||.||||||||||||
BSU10810___yi    788 CAGAGACCGAAGTGAAGCAGATTCTGTCTGATATCTAA    825


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01842 and BSU10810

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
