Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01848 and BSU10850

See Amino acid alignment / Visit BSNT_01848 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:07
# Commandline: needle
#    -asequence dna-align/BSNT_01848___yisS.1.22522.seq
#    -bsequence dna-align/BSU10850___yisS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01848___yisS-BSU10850___yisS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01848___yisS-BSU10850___yisS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01848___yisS
# 2: BSU10850___yisS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity:    1004/1029 (97.6%)
# Similarity:  1004/1029 (97.6%)
# Gaps:           0/1029 ( 0.0%)
# Score: 4920.0
# 
#
#=======================================

BSNT_01848___      1 GTGGAACATCAAGTAAGGTGCGCAGTATTAGGGCTAGGAAGGCTGGGTTA     50
                     |||||||||||||||||.||.||||||||.||..||||||||||.|||||
BSU10850___yi      1 GTGGAACATCAAGTAAGATGTGCAGTATTGGGATTAGGAAGGCTCGGTTA     50

BSNT_01848___     51 TTATCATGCGAAAAATCTCGTCACCAGTGTACCGGGGGCAAAGCTGGTTA    100
                     ||||||||||||||||||||||||||||||.||||||||||||||||||.
BSU10850___yi     51 TTATCATGCGAAAAATCTCGTCACCAGTGTGCCGGGGGCAAAGCTGGTTT    100

BSNT_01848___    101 GTGTCAGTGATCCGTTAAAAGGGAGAGCAGAGCAGGTTGCCAGAGAATTC    150
                     |||||.||||||||||||||||||||||.||||||||||||||||||.||
BSU10850___yi    101 GTGTCGGTGATCCGTTAAAAGGGAGAGCGGAGCAGGTTGCCAGAGAACTC    150

BSNT_01848___    151 GGTATCGAAAAATGGTCAGAGGACCCGTATGAAGTGTTAGAAGATCCCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    151 GGTATCGAAAAATGGTCAGAGGACCCGTATGAAGTGTTAGAAGATCCCGG    200

BSNT_01848___    201 CATTGATGCTGTCATTATCGTAACGCCGACAAGCACACATGGTGATATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    201 CATTGATGCTGTCATTATCGTAACGCCGACAAGCACACATGGTGATATGA    250

BSNT_01848___    251 TCATCAAAGCAGCCGAGAACGGCAAACAGATCTTCGTTGAAAAACCGCTG    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU10850___yi    251 TCATCAAAGCAGCCGAGAACGGCAAACAGATCTTTGTTGAAAAACCGCTG    300

BSNT_01848___    301 ACATTAAGCCTTGAGGAATCAAGAGCAGTTTCTGAAAAAGTGAAAGAGAC    350
                     ||||||||||||||||||||||.|||||.||||||||||||.||.|||||
BSU10850___yi    301 ACATTAAGCCTTGAGGAATCAAAAGCAGCTTCTGAAAAAGTTAAGGAGAC    350

BSNT_01848___    351 AGGTGTCATCTGCCAAGTCGGCTTTATGAGACGATTCGATCCCGCATACG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU10850___yi    351 AGGTGTCATCTGCCAAGTCGGCTTTATGAGACGGTTCGATCCCGCATACG    400

BSNT_01848___    401 CAGATGCCAAACGGCGGATCGACGCTGGAGAAATCGGCAAACCTATCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    401 CAGATGCCAAACGGCGGATCGACGCTGGAGAAATCGGCAAACCTATCTAT    450

BSNT_01848___    451 TATAAAGGCTTTACGCGCGACCAAGGCGCGCCTCCCGCAGAATTTATCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    451 TATAAAGGCTTTACGCGCGACCAAGGCGCGCCTCCCGCAGAATTTATCAA    500

BSNT_01848___    501 ACACAGCGGTGGAATTTTCATCGACTGTTCCATCCATGACTATGATATTG    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU10850___yi    501 ACACAGCGGTGGAATTTTTATCGACTGTTCCATCCATGACTATGATATTG    550

BSNT_01848___    551 CCCGTTATTTGCTAGGGGCGGAAATCACTTCTGTTTCAGGACACGGCAGG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    551 CCCGTTATTTGCTAGGGGCGGAAATCACTTCTGTTTCAGGACACGGCAGG    600

BSNT_01848___    601 ATTCTGAACAATCCGTTTATGGAGCAGTATGGCGATGTGGATCAGGCACT    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU10850___yi    601 ATTCTGAACAATCCGTTTATGGAGCAGTATGGCGATGTGGATCAGGCGCT    650

BSNT_01848___    651 GACGTATATTGAATTTGACTCCGGCGCAGCGGGGGACGTCGAGGCAAGCA    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU10850___yi    651 GACGTATATTGAATTTGACTCGGGCGCAGCGGGGGACGTCGAGGCAAGCA    700

BSNT_01848___    701 GAACCTCTCCATACGGACATGACATCCGGGCGGAGGTGATCGGGACAGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    701 GAACCTCTCCATACGGACATGACATCCGGGCGGAGGTGATCGGGACAGAG    750

BSNT_01848___    751 GGCAGTATTTTCATAGGGACATTGAGACATCAACATGTGACCATCCTATC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    751 GGCAGTATTTTCATAGGGACATTGAGACATCAACATGTGACCATCCTATC    800

BSNT_01848___    801 GGCTAAAGGGAGCAGTTTTGATATCATTCCAGACTTTCAAACTCGTTTTC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    801 GGCTAAAGGGAGCAGTTTTGATATCATTCCAGACTTTCAAACTCGTTTTC    850

BSNT_01848___    851 ATGAAGCCTACTGCTTGGAGCTTCAGCATTTCGCCGAGTGTGTCCGGAAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    851 ATGAAGCCTACTGCTTGGAGCTTCAGCATTTCGCCGAGTGTGTCCGGAAT    900

BSNT_01848___    901 GGAAAAACACCGATTGTGACTGATATTGATGCGACGATCAATTTAGAAGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10850___yi    901 GGAAAAACACCGATTGTGACTGATATTGATGCGACGATCAATTTAGAAGT    950

BSNT_01848___    951 GGGCATCGCAGCAACCAATTCCTTTCGAAGCGGCAGGCCGGTACAGCTAG   1000
                     |||.|||||.|||||||||||||||||||.|||||.||||||||||||||
BSU10850___yi    951 GGGTATCGCCGCAACCAATTCCTTTCGAAACGGCATGCCGGTACAGCTAG   1000

BSNT_01848___   1001 ATGTGAAGCGTGCTTATACAGGTATGTAA   1029
                     ||||||||||.||||||||||||||||||
BSU10850___yi   1001 ATGTGAAGCGCGCTTATACAGGTATGTAA   1029


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