Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01852 and BSU10870

See Amino acid alignment / Visit BSNT_01852 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:07
# Commandline: needle
#    -asequence dna-align/BSNT_01852___yisU.1.22522.seq
#    -bsequence dna-align/BSU10870___yisU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01852___yisU-BSU10870___yisU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01852___yisU-BSU10870___yisU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01852___yisU
# 2: BSU10870___yisU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity:     605/663 (91.3%)
# Similarity:   605/663 (91.3%)
# Gaps:          51/663 ( 7.7%)
# Score: 2997.0
# 
#
#=======================================

BSNT_01852___      0 --------------------------------------------------      0
                                                                       
BSU10870___yi      1 GTGACAATCTCTCTTATGATTGAAAAAAAATGTGAAAGGAGCTTTTTCAG     50

BSNT_01852___      1 -ATGAATGCAATCATTCACGGAATTGTGCTCGCGTTTGGCTTAATTTTGC     49
                      |||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi     51 CATGAATGCAATCATTCACGGAATTGTGCTCGCGTTTGGCTTAATTTTGC    100

BSNT_01852___     50 CGCTGGGAGTGCAGAATGTGTTTATTTTTCAGCAAGGCGCGTGGCAAAAG     99
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU10870___yi    101 CGCTGGGAGTGCAGAATGTGTTTATTTTTCAGCAAGGCGCGTTGCAAAAG    150

BSNT_01852___    100 CATATTTGGCGGGCTCTCCCAGCTGTCATCAGTGCTTCAGTCTGCGATAC    149
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    151 CATATTTGGCGGGCTCTCCCAGCTGTCATCAGTGCTTCAGTCTGCGATAC    200

BSNT_01852___    150 CCTGTTAATCGTATTAGCCGTTGCGGGCGTATCTGTCATTGTGCAGGAGC    199
                     |.|||||||.||||||||||||||||||||.|||||||||||||||||||
BSU10870___yi    201 CTTGTTAATTGTATTAGCCGTTGCGGGCGTGTCTGTCATTGTGCAGGAGC    250

BSNT_01852___    200 TGCCTGTGTTTGAGACAGTCATGATGGCCGGCGGATTTTTATTTTTGCTT    249
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    251 TGCCTGTGTTTGAGACAGTCATGATGGCCGGCGGATTTTTATTTTTGCTT    300

BSNT_01852___    250 TATATGGGCTGGGTGACTTGGAACAGCCGTCCGAACACAAGCCAAAACGA    299
                     |||||||||||||||||||||||||.|||||||||||||||||||||.||
BSU10870___yi    301 TATATGGGCTGGGTGACTTGGAACATCCGTCCGAACACAAGCCAAAATGA    350

BSNT_01852___    300 GAAACATACGTTCACACCAAAAAAGCAAGCTGCGTTTGCGGCCGCTGTTT    349
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    351 GAAACATACGTTCACACCAAAAAAGCAAGCTGCGTTTGCGGCCGCTGTTT    400

BSNT_01852___    350 CTCTTTTAAACCCGCATGCCATTCTGGACACGATCGGCGTCATCGGCACG    399
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    401 CTCTTTTAAACCCGCATGCCATTCTGGACACGATCGGCGTCATCGGCACG    450

BSNT_01852___    400 AGCTCTCTTCAATATTCGGGGCTTGAGAAATGGCTCTTTATGGCCGCCTG    449
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    451 AGCTCTCTTCAATATTCGGGGCTTGAGAAATGGCTCTTTATGGCCGCCTG    500

BSNT_01852___    450 CATCGCTGTGTCTTGGATTTGGTTCATCAGCCTTGCAATAGCGGGTCGGT    499
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU10870___yi    501 CATCGCTGTGTCTTGGATTTGGTTCATCAGCCTTGCAATAGCGGGCCGGT    550

BSNT_01852___    500 TGTTTCAGACGATAGATACGAGCGGCAGGCTTATGCTGATCGTAAACAAA    549
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    551 TGTTTCAGACGATAGATACGAGCGGCAGGCTTATGCTGATCGTAAACAAA    600

BSNT_01852___    550 TGCTCTGCAGCGGTAATGTGGGCAGCGGCAGGATATTTTGGGGTGTCACT    599
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10870___yi    601 TGCTCTGCAGCGGTAATGTGGGCAGCGGCAGGATATTTTGGGGTGTCACT    650

BSNT_01852___    600 CTTTTGCAATTGA    612
                     |||||||||||||
BSU10870___yi    651 CTTTTGCAATTGA    663


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