Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01853 and BSU10880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:08
# Commandline: needle
# -asequence dna-align/BSNT_01853___yisV.1.22522.seq
# -bsequence dna-align/BSU10880___yisV.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01853___yisV-BSU10880___yisV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01853___yisV-BSU10880___yisV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01853___yisV
# 2: BSU10880___yisV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1455
# Identity: 1434/1455 (98.6%)
# Similarity: 1434/1455 (98.6%)
# Gaps: 6/1455 ( 0.4%)
# Score: 7110.0
#
#
#=======================================
BSNT_01853___ 1 ------TTGTCGCAATGGCAGCCAAGCCGAAAGTCGGATATTCCGCTGCA 44
|||||||||||||||||||||||||||||||||.||||||||||
BSU10880___yi 1 ATGACCTTGTCGCAATGGCAGCCAAGCCGAAAGTCGGATGTTCCGCTGCA 50
BSNT_01853___ 45 TCGGCAGATCGAACAATATATGAAAGACAAGATTCTTCACGGAGAGTGGG 94
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 51 TCGGCAGATCGAACAATATATGAAAGACAAGATTCTTCACGGAGAGTGGG 100
BSNT_01853___ 95 CTGTAGGGACGAAAATCCCCTCACAGAGAACGCTGGCCGACATGTTTCAA 144
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 101 CTGTAGGGACGAAAATCCCCTCACAGAGAACGCTGGCCGACATGTTTCAA 150
BSNT_01853___ 145 GTCAACCGCAGCACAGTCACAGCAGCTATAGATGAACTCACGTCTCAAGG 194
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU10880___yi 151 GTCAACCGCAGCACAGTCACAGCAGCCATAGATGAACTCACGTCTCAAGG 200
BSNT_01853___ 195 CTTGTTAGAGGGAAGAAGAGGCGGCGGTACGAAGGTTGTAAACAGTACTT 244
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU10880___yi 201 CTTGTTAGAGGGAAGAAAAGGCGGCGGTACGAAGGTTGTAAACAGTACTT 250
BSNT_01853___ 245 GGAGCGTGCTGGCGGCTGAGCCACCGCTTGATTGGAGCGATTACGTCCGT 294
|||||||||||.||||||||||.|||||||||||||||||||||||||||
BSU10880___yi 251 GGAGCGTGCTGACGGCTGAGCCTCCGCTTGATTGGAGCGATTACGTCCGT 300
BSNT_01853___ 295 TCGGGCATTCATCGCGCCAATTCTTCCATCATTCAAGCTATTAATCAGAA 344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 301 TCGGGCATTCATCGCGCCAATTCTTCCATCATTCAAGCTATTAATCAGAA 350
BSNT_01853___ 345 CGAACCAAGAGCGGATATCATCAGATTAGGAACTGGAGAACTATCACCGG 394
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU10880___yi 351 CGAACCAAGAGCGGATATCATCAGATTAGGAACTGGAGAACTTTCACCGG 400
BSNT_01853___ 395 ATCTTGTGCCTGCTGACACAATTGGACGGATGTTTCAGCAAATCAATCCG 444
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 401 ATCTTGTGCCTGCTGACACAATTGGACGGATGTTTCAGCAAATCAATCCG 450
BSNT_01853___ 445 GGCGCCCTGTCTTTAGGATATGAGCAGCCGAAAGGAAACCGTCAGCTGCG 494
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 451 GGCGTCCTGTCTTTAGGATATGAGCAGCCGAAAGGAAACCGTCAGCTGCG 500
BSNT_01853___ 495 GGAGGCAGTGGCCGACCATTTAAAAGGAAAGAAGATCCATGTGTCACCGT 544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 501 GGAGGCAGTGGCCGACCATTTAAAAGGAAAGAAGATCCATGTGTCACCGT 550
BSNT_01853___ 545 CTGCAATTTTAATTGTGTCCGGTGCACTTCAGGCACTTCAGCTCATCTCA 594
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 551 CTGCAATTTTAATTGTGTCCGGTGCACTTCAGGCACTTCAGCTCATCTCA 600
BSNT_01853___ 595 ATTGGACTTTTAAAACGAGATTCTGTCATTTTGACGGAGAAGCCGTCCTA 644
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 601 ATTGGACTTTTAAAACGAGATTCTGTCATTTTGACGGAGAAGCCGTCCTA 650
BSNT_01853___ 645 CCTTCAATCCTTGCATGTATTTCAATCAGCTGGGATGCGGCTTCGCGGCT 694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 651 CCTTCAATCCTTGCATGTATTTCAATCAGCTGGGATGCGGCTTCGCGGCT 700
BSNT_01853___ 695 TGCCGATGGATGATGAAGGGGTCAAAGCGGGGCTTGTTTCTTCTAATCGA 744
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 701 TGCCGATGGATGATGAAGGGGTCAAAGCGGGGCTTGTTTCTTCTAATCGA 750
BSNT_01853___ 745 AAACAATATGGAGGACAGCTGCTTTACACGATTCCGTCGTTTCATAATCC 794
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 751 AAACAATATGGAGGACAGCTGCTTTACACGATTCCGTCGTTTCATAATCC 800
BSNT_01853___ 795 GACAGGCACAGTCATGTCAGAGCAGCGAAGGAAAGAGATCATCAGCCTGT 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 801 GACAGGCACAGTCATGTCAGAGCAGCGAAGGAAAGAGATCATCAGCCTGT 850
BSNT_01853___ 845 CAAAAAAAGAGCAGCTGCCCATCATTGAGGATGATGCGTACGGTGATTTA 894
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU10880___yi 851 CAAAAAAAGAGCAGATGCCCATCATTGAGGATGATGCGTACGGTGATTTA 900
BSNT_01853___ 895 TGGTTTGAAGAAAAACCTCCGCAGCCGTTGAAAGCAATGGATCATGAGGG 944
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU10880___yi 901 TGGTTTGAAGAAAAACCGCCGCAGCCGTTGAAAGCAATGGATCATGAGGG 950
BSNT_01853___ 945 CAATATTCTGTATCTGGGCACGTTTTCAAAAACGGTTAGCCCCGGCCTGC 994
|||||||||||||||||||.|||||||||||||||||||||||||.||||
BSU10880___yi 951 CAATATTCTGTATCTGGGCGCGTTTTCAAAAACGGTTAGCCCCGGTCTGC 1000
BSNT_01853___ 995 GAATCGGCTGGCTTGCCGGTCCGGAGCCGGTTATTGAAAGGTTGGCGGAC 1044
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU10880___yi 1001 GAATCGGCTGGCTTGCCGGTCCGGAGCCGGTTATTGAAAGGCTGGCGGAC 1050
BSNT_01853___ 1045 ATTAAAATGCAGACAGACTACGGATCAAGCGGCCTGTCCCAGTGGGCGGC 1094
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1051 ATTAAAATGCAGACAGACTACGGATCAAGCGGCCTGTCCCAGTGGGCGGC 1100
BSNT_01853___ 1095 TGCCGAGTGGCTGTCACAGGGGTATTATGAAGAGCATCTGACTTGGGTAC 1144
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU10880___yi 1101 TGCCGAGTGGCTGTCACAGGGATATTATGAAGAGCATCTGACTTGGGTAC 1150
BSNT_01853___ 1145 GCAGGAAGCTTAAAGAAAGGAGAGACGCCGCCGTTCATTTTCTCGAGCGG 1194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1151 GCAGGAAGCTTAAAGAAAGGAGAGACGCCGCCGTTCATTTTCTCGAGCGG 1200
BSNT_01853___ 1195 TATGCCGGGGACATTGCCACGTGGCGGATTCCCGCAGGCGGCTTTTATAT 1244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1201 TATGCCGGGGACATTGCCACGTGGCGGATTCCCGCAGGCGGCTTTTATAT 1250
BSNT_01853___ 1245 TTGGGTGACATTTCACAAAAACCTGCCTGTTAGCCGTTTCTTTTATGGAT 1294
||||||||||||||||||||||||||||||.||||||||||||||||.||
BSU10880___yi 1251 TTGGGTGACATTTCACAAAAACCTGCCTGTCAGCCGTTTCTTTTATGAAT 1300
BSNT_01853___ 1295 TGCTGAAACGGCAGGTGCTTGTGAATCCCGGCTATATTTATGACGGTGAA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1301 TGCTGAAACGGCAGGTGCTTGTGAATCCCGGCTATATTTATGACGGTGAA 1350
BSNT_01853___ 1345 GACCGAAACAGCATCAGGCTGTCATATTCCTATGCATCTCTTGGAGATTT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1351 GACCGAAACAGCATCAGGCTGTCATATTCCTATGCATCTCTTGGAGATTT 1400
BSNT_01853___ 1395 GGAAACTGGCATTAAAGCGGCAGCTGAAACAGCACGCCGCCTGATGATGT 1444
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10880___yi 1401 GGAAACTGGCATTAAAGCGGCAGCTGAAACAGCACGCCGCCTGATGATGT 1450
BSNT_01853___ 1445 CCTAG 1449
|||||
BSU10880___yi 1451 CCTAG 1455
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