Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01862 and BSU11030

See Amino acid alignment / Visit BSNT_01862 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:09
# Commandline: needle
#    -asequence dna-align/BSNT_01862___yitL.1.22522.seq
#    -bsequence dna-align/BSU11030___yitL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01862___yitL-BSU11030___yitL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01862___yitL-BSU11030___yitL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BSU11030___yitL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity:     843/897 (94.0%)
# Similarity:   843/897 (94.0%)
# Gaps:          48/897 ( 5.4%)
# Score: 4191.0
# 
#
#=======================================

BSNT_01862___      1 ------------------------------------------------AT      2
                                                                     ||
BSU11030___yi      1 ATGTTAACAAAATCCGCAGAGAATAAGCGGAACAGGAAGGACGATAGCAT     50

BSNT_01862___      3 GAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTTCG     52
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi     51 GAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTTCG    100

BSNT_01862___     53 GTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTGAA    102
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    101 GTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTGAA    150

BSNT_01862___    103 ATGACTGAGGATATCGGGGACAGAGACGAAGTAGAAGTCTTTATATACGT    152
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11030___yi    151 ATGACTGAGGATATCGAGGACAGAGACGAAGTAGAAGTCTTTATATACGT    200

BSNT_01862___    153 CGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGGTCATCAGCG    202
                     .|||||||||||||||||||||||||||||||||||||||.|||||||||
BSU11030___yi    201 AGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGATCATCAGCG    250

BSNT_01862___    203 CGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGGGC    252
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    251 CGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGGGC    300

BSNT_01862___    253 GTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAGCA    302
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    301 GTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAGCA    350

BSNT_01862___    303 TTTGCCGCCGTATGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTACT    352
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU11030___yi    351 TTTGCCGCCGTACGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTACT    400

BSNT_01862___    353 GTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGCCG    402
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    401 GTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGCCG    450

BSNT_01862___    403 GAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATCTGATGAA    452
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    451 GAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATCTGATGAA    500

BSNT_01862___    453 TAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCATTCG    502
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    501 TAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCATTCG    550

BSNT_01862___    503 TGATCACGGATGACGGTATCCGCTGTTTTATTCACCCGTCAGAAAGAAAA    552
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    551 TGATCACGGATGACGGTATCCGCTGTTTTATTCACCCGTCAGAAAGAAAA    600

BSNT_01862___    553 GAGGAGCCAAGACTGGGTTCAAAAGTCACAGGCCGGGTGATTCAAGTGAA    602
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU11030___yi    601 GAGGAGCCAAGACTGGGTTCAAGAGTCACAGGCCGGGTGATTCAAGTGAA    650

BSNT_01862___    603 AGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGATGCAA    652
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    651 AGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGATGCAA    700

BSNT_01862___    653 TGTCTGTTGATGCTGAGTGCATTCTAACGTATATGAGAATGAGAAACGGT    702
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    701 TGTCAGTTGATGCTGAGTGCATTCTAACGTATATGAGAATGAGAAACGGT    750

BSNT_01862___    703 GCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAACGTTT    752
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    751 GCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAACGTTT    800

BSNT_01862___    753 TAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGATGAAAA    802
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    801 TAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGATGAAAA    850

BSNT_01862___    803 ACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAATAG    849
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    851 ACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAATAG    897


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.