Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01871 and BSU11160
See
Amino acid alignment /
Visit
BSNT_01871 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:10
# Commandline: needle
# -asequence dna-align/BSNT_01871___yitW.1.22522.seq
# -bsequence dna-align/BSU11160___yitW.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01871___yitW-BSU11160___yitW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01871___yitW-BSU11160___yitW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01871___yitW
# 2: BSU11160___yitW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 297/309 (96.1%)
# Similarity: 297/309 (96.1%)
# Gaps: 0/309 ( 0.0%)
# Score: 1437.0
#
#
#=======================================
BSNT_01871___ 1 GTGGAAGAAGCATTAAAAGAAAACATCATGGGCGCCCTGGAACAGGTTGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11160___yi 1 GTGGAAGAAGCATTAAAAGAAAACATCATGGGCGCCCTGGAACAGGTTGT 50
BSNT_01871___ 51 CGATCCTGAGCTTGGCGTTGATATCGTGAACCTTGGTTTGGTATACGATG 100
|||||||||||||||||||||||||||||||||.||.||||||||.||.|
BSU11160___yi 51 CGATCCTGAGCTTGGCGTTGATATCGTGAACCTCGGCTTGGTATATGACG 100
BSNT_01871___ 101 TTGACATGGATGAAGACGGCTTAACGCACGTGACGATGACACTGACATCA 150
||||.|||||||||||.|||||.||||||.|.||.|||||.||.||||||
BSU11160___yi 101 TTGATATGGATGAAGATGGCTTGACGCACATCACCATGACGCTAACATCA 150
BSNT_01871___ 151 ATGGGATGCCCTTTAGCGCCGATTATCGTGGATGAGGTGAAAAAAGCATT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11160___yi 151 ATGGGATGCCCTTTAGCGCCGATTATCGTGGATGAGGTGAAAAAAGCATT 200
BSNT_01871___ 201 AGCGGACCTTCCTGAAGTGAAAGACACAGAGGTTCACATTGTATGGAATC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11160___yi 201 AGCGGACCTTCCTGAAGTGAAAGACACAGAGGTTCACATTGTATGGAATC 250
BSNT_01871___ 251 CGCCTTGGACTAGGGATAAAATGTCCAGATACGCAAAAATTGCGCTTGGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11160___yi 251 CGCCTTGGACTAGGGATAAAATGTCCAGATACGCAAAAATTGCGCTTGGC 300
BSNT_01871___ 301 ATTCAATAA 309
|||||||||
BSU11160___yi 301 ATTCAATAA 309
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.