Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01879 and BSU11190

See Amino acid alignment / Visit BSNT_01879 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:10
# Commandline: needle
#    -asequence dna-align/BSNT_01879___argC.1.22522.seq
#    -bsequence dna-align/BSU11190___argC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01879___argC-BSU11190___argC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01879___argC-BSU11190___argC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01879___argC
# 2: BSU11190___argC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1038
# Identity:    1030/1038 (99.2%)
# Similarity:  1030/1038 (99.2%)
# Gaps:           0/1038 ( 0.0%)
# Score: 5118.0
# 
#
#=======================================

BSNT_01879___      1 TTGAAAATAGGAATTGTAGGTGCTACAGGATATGGAGGCACCGAACTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar      1 TTGAAAATAGGAATTGTAGGTGCTACAGGATATGGAGGCACCGAACTTGT     50

BSNT_01879___     51 CAGGATTCTTTCGCATCATCCTCATGCAGAGGAATGCATACTTTATTCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar     51 CAGGATTCTTTCGCATCATCCTCATGCAGAGGAATGCATACTTTATTCAT    100

BSNT_01879___    101 CCAGCGGAGAAGGGAATGTCTATAGCGAGGGTTATCCTCATCTTACCGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    101 CCAGCGGAGAAGGGAATGTCTATAGCGAGGGTTATCCTCATCTTACCGGC    150

BSNT_01879___    151 TTAGCGGATCAGCAGCTGAAGCCGATTGATATGAATACGATCAAACACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    151 TTAGCGGATCAGCAGCTGAAGCCGATTGATATGAATACGATCAAACACGA    200

BSNT_01879___    201 AATAGATATCATGTTTCTCGCTGCGCCGCCCGGAGTATCAAGTGAATTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    201 AATAGATATCATGTTTCTCGCTGCGCCGCCCGGAGTATCAAGTGAATTGA    250

BSNT_01879___    251 CTCCAAAGCTGGCAGACGCGGGAATTCCGGTTATTGATCTGTCAGGTGAT    300
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU11190___ar    251 CTCCAAAGCTGGCAGACGCGGGAATTACGGTTATTGATCTGTCAGGTGAT    300

BSNT_01879___    301 CTGAGGATACAAGAACCGGCTGAATATGAAAAATGGTATAAACGGACAGC    350
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    301 CTGAGGATAAAAGAACCGGCTGAATATGAAAAATGGTATAAACGGACAGC    350

BSNT_01879___    351 GGCACCGAAGGCGGTGATTCAAGAGGCGGTATACGGTCTGGCAGAACTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    351 GGCACCGAAGGCGGTGATTCAAGAGGCGGTATACGGTCTGGCAGAACTGA    400

BSNT_01879___    401 ATCAACTGCAAATTCAACAGGCGAAACTCATTGCCAATCCAGGCTGTTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    401 ATCAACTGCAAATTCAACAGGCGAAACTCATTGCCAATCCAGGCTGTTTT    450

BSNT_01879___    451 CCAACAGCTGTTTTGCTTGGCCTCGCGCCATTGGCTCAAAAGAAACTGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    451 CCAACAGCTGTTTTGCTTGGCCTCGCGCCATTGGCTCAAAAGAAACTGCT    500

BSNT_01879___    501 CGATGAATCTTTCGTTATCGTTGACGCGAAGACGGGTGTTTCCGGAGCGG    550
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU11190___ar    501 CGATGAATCTTTCGTTATCGTTGACGCGAAGACCGGTGTTTCCGGAGCGG    550

BSNT_01879___    551 GAAGAAAAGCATCCATGGGAACCCATTTTTCTGAGCTGAACGGCAATTTT    600
                     ||||||||||||||||||||||.|||||||||||||||||||.|||||||
BSU11190___ar    551 GAAGAAAAGCATCCATGGGAACTCATTTTTCTGAGCTGAACGACAATTTT    600

BSNT_01879___    601 AAAATTTATAAAGTCAATGAACATCAGCACACGCCGGAAATTGAGCAGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    601 AAAATTTATAAAGTCAATGAACATCAGCACACGCCGGAAATTGAGCAGGC    650

BSNT_01879___    651 GCTGAATGAATGGCAGCCAGGCCTCGGGCCCATTACATTTTCGGCTCACT    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU11190___ar    651 GCTGAATGAATGGCAGCCAGGTCTCGGGCCCATTACATTTTCGGCTCACT    700

BSNT_01879___    701 TGGTTCCGATGACAAGGGGCATCATGGCGACGATGTATACCAGATTAACC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    701 TGGTTCCGATGACAAGGGGCATCATGGCGACGATGTATACCAGATTAACC    750

BSNT_01879___    751 TGTGATCTATCCGCAGATGACCTGCATGATTTATATTCGGAATTTTACCA    800
                     |||||.|||.||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    751 TGTGACCTAACCGCAGATGACCTGCATGATTTATATTCGGAATTTTACCA    800

BSNT_01879___    801 AGATTCATATTTTGTGAGAGTGAGGCCAAAAGGTCAGTACCCGCAAACGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    801 AGATTCATATTTTGTGAGAGTGAGGCCAAAAGGTCAGTACCCGCAAACGA    850

BSNT_01879___    851 AAGAAGTGTACGGCAGCAATTTCTGTGATATCGCCGTGACCCTCGATGAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    851 AAGAAGTGTACGGCAGCAATTTCTGTGATATCGCCGTGACCCTCGATGAG    900

BSNT_01879___    901 AGAACGAACAGAGTCACGATCGTCTCGGTAATCGATAATTTAATGAAGGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    901 AGAACGAACAGAGTCACGATCGTCTCGGTAATCGATAATTTAATGAAGGG    950

BSNT_01879___    951 TGCCGCCGGTCAGGCAGTGCAAAACTTTAATTTGATGAATGGCTGGAATG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11190___ar    951 TGCCGCCGGTCAGGCAGTGCAAAACTTTAATTTGATGAATGGCTGGAATG   1000

BSNT_01879___   1001 AAGAAACTGGACTCACCATCACGCCAATTTATCCATAG   1038
                     ||||||||||||||||||||||||||||||||||||||
BSU11190___ar   1001 AAGAAACTGGACTCACCATCACGCCAATTTATCCATAG   1038


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01879 and BSU11190

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
