Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01882 and BSU11220

See Amino acid alignment / Visit BSNT_01882 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:11
# Commandline: needle
#    -asequence dna-align/BSNT_01882___argD.1.22522.seq
#    -bsequence dna-align/BSU11220___argD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01882___argD-BSU11220___argD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01882___argD-BSU11220___argD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01882___argD
# 2: BSU11220___argD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1158
# Identity:    1144/1158 (98.8%)
# Similarity:  1144/1158 (98.8%)
# Gaps:           0/1158 ( 0.0%)
# Score: 5664.0
# 
#
#=======================================

BSNT_01882___      1 ATGAGCAGCTTGTTTCAAACCTACGGCCGTTGGGATATTGACCTCAAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11220___ar      1 ATGAGCAGCTTGTTTCAAACCTACGGCCGTTGGGATATTGACATCAAAAA     50

BSNT_01882___     51 AGCAAAGGGAACGTACGTTGAGGATCAAAACGGCAAATCATACCTTGATT    100
                     |||||||||||||||||||||||||||||||||||||.|.||||||||||
BSU11220___ar     51 AGCAAAGGGAACGTACGTTGAGGATCAAAACGGCAAAACGTACCTTGATT    100

BSNT_01882___    101 TCATTCAGGGGATTGCGGTATCAAATCTAGGACACTGCCATGAAGCGGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    101 TCATTCAGGGGATTGCGGTATCAAATCTAGGACACTGCCATGAAGCGGTG    150

BSNT_01882___    151 ACAGAGGCAGTCAAAAAACAGCTTGACAGCGTATGGCACGTATCTAACCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11220___ar    151 ACAGAGGCAGTCAAAAAACAGCTTGACAGCGTATGGCACGTATCCAACCT    200

BSNT_01882___    201 GTTTCAAAACAGTCTCCAAGAGCAAGCGGCGCAGAAGCTGGCAGCGCATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    201 GTTTCAAAACAGTCTCCAAGAGCAAGCGGCGCAGAAGCTGGCAGCGCATA    250

BSNT_01882___    251 GTGCAGGAGATCTTGTCTTTTTCTGCAACAGCGGCGCAGAGGCGAATGAA    300
                     ||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU11220___ar    251 GTGCGGGAGATCTTGTCTTTTTCTGCAACAGCGGCGCGGAGGCGAATGAA    300

BSNT_01882___    301 GGTGCGATAAAGCTTGCCCGAAAAGCAACTGGAAAAACAAAAATCATCAC    350
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU11220___ar    301 GGTGCGATAAAGCTTGCCAGAAAAGCAACTGGAAAAACAAAAATCATCAC    350

BSNT_01882___    351 TTTTCTTCAGTCGTTCCATGGCCGCACGTATGCAGGGATGGCTGCGACCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    351 TTTTCTTCAGTCGTTCCATGGCCGCACGTATGCAGGGATGGCTGCGACCG    400

BSNT_01882___    401 GACAGGATAAAATCAAAACAGGCTTCGGCCCGATGCTTGAAGGCTTTCAC    450
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU11220___ar    401 GACAGGATAAAATCAAAACAGGCTTCGGCCCGATGCTTGGAGGCTTTCAC    450

BSNT_01882___    451 TACCTGCCATACAATGATCCTTCTGCTTTTAAAGCTCTTGGGGAGGAAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    451 TACCTGCCATACAATGATCCTTCTGCTTTTAAAGCTCTTGGGGAGGAAGG    500

BSNT_01882___    501 CGATATTGCCGCGGTGATGCTTGAAACAGTGCAGGGAGAAGGAGGAGTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    501 CGATATTGCCGCGGTGATGCTTGAAACAGTGCAGGGAGAAGGAGGAGTCA    550

BSNT_01882___    551 ATCCGGCGAGTGCTGAATTTTTATCAGCCGTACAGTCGTTTTGCAAGGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    551 ATCCGGCGAGTGCTGAATTTTTATCAGCCGTACAGTCGTTTTGCAAGGAA    600

BSNT_01882___    601 AAGCAAGCCCTTCTCATCATTGATGAAATCCAGACCGGCATCGGACGGAC    650
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU11220___ar    601 AAGCAAGCCCTTCTCATTATTGATGAAATCCAGACCGGCATCGGACGGAC    650

BSNT_01882___    651 GGGAAAAGGCTTCGCATATGAGCACTTCGGACTCTCACCGGATATCATCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    651 GGGAAAAGGCTTCGCATATGAGCACTTCGGACTCTCACCGGATATCATCA    700

BSNT_01882___    701 CAGTCGCCAAAGGATTGGGAAACGGCTTTCCGGTCGGCGCTGTCATTGGA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU11220___ar    701 CAGTCGCCAAAGGATTGGGAAACGGCTTTCCGGTCGGCGCTGTCATCGGA    750

BSNT_01882___    751 AAAAAACAGCTTGGAGAAGCGTTTACCCCTGGTTCTCACGGAACGACTTT    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    751 AAGAAACAGCTTGGAGAAGCGTTTACCCCTGGTTCTCACGGAACGACTTT    800

BSNT_01882___    801 CGGAGGAAATATGCTGGCGATGGCTGCTGTGAATGCCACATTGCAAATTG    850
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    801 CGGAGGAAACATGCTGGCGATGGCTGCTGTGAATGCCACATTGCAAATTG    850

BSNT_01882___    851 TATTCCAGCCTGACTTTTTGCAAGAGGCTGCTGATAAAGGGGCGTTTTTA    900
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU11220___ar    851 TATTCCAGCCTGACTTTTTGCAAGAGGCTGCTGACAAAGGGGCGTTTTTA    900

BSNT_01882___    901 AAAGAACAGCTTGAGGCGGAGCTAAAGAGCCCTTTTGTTAAACAAATCCG    950
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU11220___ar    901 AAAGAACAGCTTGAGGCAGAGCTAAAGAGCCCTTTTGTTAAACAAATCCG    950

BSNT_01882___    951 AGGTAAAGGATTAATGCTTGGAATTGAGTGTGATGGCCCGGTTGCTGACA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar    951 AGGTAAAGGATTAATGCTTGGAATTGAGTGTGATGGCCCGGTTGCTGACA   1000

BSNT_01882___   1001 TTATTGCTGAATTGCAGACATTAGGCTTGCTTGTATTGCCGGCCGGCCCG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar   1001 TTATTGCTGAATTGCAGACATTAGGCTTGCTTGTATTGCCGGCCGGCCCG   1050

BSNT_01882___   1051 AACGTGATTCGGCTGCTGCCGCCGCTCACCGTGACTAAGGATGAAATAGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar   1051 AACGTGATTCGGCTGCTGCCGCCGCTCACCGTGACTAAGGATGAAATAGC   1100

BSNT_01882___   1101 AGAAGCCGTCAGCAAGCTGAAACAGGCAATCGCTCATCATTCCGCTGTAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11220___ar   1101 AGAAGCCGTCAGCAAGCTGAAACAGGCAATCGCTCATCATTCCGCTGTAA   1150

BSNT_01882___   1151 ACCAGTGA   1158
                     ||||||||
BSU11220___ar   1151 ACCAGTGA   1158


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