Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01890 and BSU11280

See Amino acid alignment / Visit BSNT_01890 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:13
# Commandline: needle
#    -asequence dna-align/BSNT_01890___yjaU.1.22522.seq
#    -bsequence dna-align/BSU11280___yjaU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01890___yjaU-BSU11280___yjaU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01890___yjaU-BSU11280___yjaU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01890___yjaU
# 2: BSU11280___yjaU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 735
# Identity:     731/735 (99.5%)
# Similarity:   731/735 (99.5%)
# Gaps:           0/735 ( 0.0%)
# Score: 3639.0
# 
#
#=======================================

BSNT_01890___      1 ATGGGAATAACGGAAAGATACTTTCAACTGGGAACGGAGCATAATGTCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj      1 ATGGGAATAACGGAAAGATACTTTCAACTGGGAACGGAGCATAATGTCAT     50

BSNT_01890___     51 TCATCTGCCCTATCGCCCGAACGGCTTCGGCATCTTTATCTTGGGGGACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj     51 TCATCTGCCCTATCGCCCGAACGGCTTCGGCATCTTTATCTTGGGGGACA    100

BSNT_01890___    101 GAACCCACTTTGTCGGACATGATTCAAGCTTTTGGCAGCAGCATTATGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    101 GAACCCACTTTGTCGGACATGATTCAAGCTTTTGGCAGCAGCATTATGGC    150

BSNT_01890___    151 AGAAATCAGCTTCTGAGCATGTTGAGGAATGAAGGATACACTCTTTTTAA    200
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU11280___yj    151 AGAAATCAGCTTCTGAGCATGTTGATGAATGAAGGATACACTCTTTTTAA    200

BSNT_01890___    201 CAGCAATCTGTTCGGAAGGCATTGGGGGGCGGAAAAAGCAGTCACCTATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    201 CAGCAATCTGTTCGGAAGGCATTGGGGGGCGGAAAAAGCAGTCACCTATG    250

BSNT_01890___    251 CCAAACAGCTGATACATTCTGTGCTGAAGCAGGAAATCCTCAATCCGAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    251 CCAAACAGCTGATACATTCTGTGCTGAAGCAGGAAATCCTCAATCCGAAG    300

BSNT_01890___    301 ATTCATATTTTAGCAGAAGGCATGGGTGCTCTCGTGGCCGATGAACTGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    301 ATTCATATTTTAGCAGAAGGCATGGGTGCTCTCGTGGCCGATGAACTGCT    350

BSNT_01890___    351 TCGTTTTTCCCCGGATCATATCCGCTCAGCCGCAATGTTGAATCCTTGTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    351 TCGTTTTTCCCCGGATCATATCCGCTCAGCCGCAATGTTGAATCCTTGTC    400

BSNT_01890___    401 TCGATCTTCAGGCACATTATGAATCGGAAAAAGAAAATAAATTTTTCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    401 TCGATCTTCAGGCACATTATGAATCGGAAAAAGAAAATAAATTTTTCTAT    450

BSNT_01890___    451 AAGCAATTTTTGAAAGAAGTTTCGAAAAGCTACGGAATTTCTGAAAAAGA    500
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU11280___yj    451 AAGCAATTTTTGAAAGAAGTATCGAAAAGCTACGGAATTTCTGAAAAAGA    500

BSNT_01890___    501 AGCGGAAGCGCTTCGTTATAAAACAATTCAAAGCTACCCGAGCGGCGTAC    550
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU11280___yj    501 AGCGGAAGCGATTCGTTATAAAACAATTCAAAGCTACCCGAGCGGCGTAC    550

BSNT_01890___    551 CGGTTCATATATGGCAGCGTATGACCGGAGCTCCATATCCCTACAGCGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    551 CGGTTCATATATGGCAGCGTATGACCGGAGCTCCATATCCCTACAGCGTA    600

BSNT_01890___    601 CATGCGGAAGTTTTCAAGGAAAAACAGCAAAAGCAAGGCTCACCGGTCGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    601 CATGCGGAAGTTTTCAAGGAAAAACAGCAAAAGCAAGGCTCACCGGTCGA    650

BSNT_01890___    651 CATGACATTTCATTTATTTGAGCATCCAAGCAGAATTTATGCATCAATTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11280___yj    651 CATGACATTTCATTTATTTGAGCATCCAAGCAGAATTTATGCATCAATTT    700

BSNT_01890___    701 GCAAATTCTTTCACAGTCATGAAAAAGAATTATAG    735
                     |||||||||||||.|||||||||||||||||||||
BSU11280___yj    701 GCAAATTCTTTCATAGTCATGAAAAAGAATTATAG    735


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.