Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01903 and BSU11360

See Amino acid alignment / Visit BSNT_01903 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:14
# Commandline: needle
#    -asequence dna-align/BSNT_01903___appD.1.22522.seq
#    -bsequence dna-align/BSU11360___appD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01903___appD-BSU11360___appD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01903___appD-BSU11360___appD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01903___appD
# 2: BSU11360___appD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 987
# Identity:     981/987 (99.4%)
# Similarity:   981/987 (99.4%)
# Gaps:           0/987 ( 0.0%)
# Score: 4881.0
# 
#
#=======================================

BSNT_01903___      1 ATGAGCACACTTTTAGAAGTGAATAATTTAAAGACATATTTTTTCAGGAA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU11360___ap      1 ATGAGCACACTTTTAGAAGTGAATAATTTAAAGACTTATTTTTTCAGGAA     50

BSNT_01903___     51 AAAGGAGCCGATCCCTGCGGTTGACGGAGTCGATTTTCACATCAGCAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap     51 AAAGGAGCCGATCCCTGCGGTTGACGGAGTCGATTTTCACATCAGCAAAG    100

BSNT_01903___    101 GCGAAACCGTCGCGCTTGTAGGTGAATCGGGCTCCGGAAAAAGCATTACT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    101 GCGAAACCGTCGCGCTTGTAGGTGAATCGGGCTCCGGAAAAAGCATTACT    150

BSNT_01903___    151 TCTTTATCAATTATGGGCCTCGTCCAAAGCTCAGGCGGAAAAATCATGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    151 TCTTTATCAATTATGGGCCTCGTCCAAAGCTCAGGCGGAAAAATCATGGA    200

BSNT_01903___    201 CGGCTCTATTAAACTCGAAGACAAAGACCTCACCTCATTCACTGAAAACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    201 CGGCTCTATTAAACTCGAAGACAAAGACCTCACCTCATTCACTGAAAACG    250

BSNT_01903___    251 ATTATTGCAAAATCCGCGGTAACGAAGTATCCATGATCTTTCAGGAACCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    251 ATTATTGCAAAATCCGCGGTAACGAAGTATCCATGATCTTTCAGGAACCA    300

BSNT_01903___    301 ATGACCTCCCTTAATCCGGTGTTAACAATCGGAGAACAAATTACCGAAGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    301 ATGACCTCCCTTAATCCGGTGTTAACAATCGGAGAACAAATTACCGAAGT    350

BSNT_01903___    351 GCTGATTTACCATAAAAACATGAAGAAAAAAGAAGCCCGTCAACGAGCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    351 GCTGATTTACCATAAAAACATGAAGAAAAAAGAAGCCCGTCAACGAGCTG    400

BSNT_01903___    401 TTGAACTCTTGCAGATGGTCGGTTTCTCCCGGGCGGAGCAAATTATGAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    401 TTGAACTCTTGCAGATGGTCGGTTTCTCCCGGGCGGAGCAAATTATGAAG    450

BSNT_01903___    451 GAGTACCCGCATCGGCTGTCCGGCGGTATGAGACAGAGGGTGATGATTGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    451 GAGTACCCGCATCGGCTGTCCGGCGGTATGAGACAGAGGGTGATGATTGC    500

BSNT_01903___    501 CATCGCACTGAGCTGTAATCCTAAACTGCTCATTGCCGATGAACCAACGA    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU11360___ap    501 CATCGCACTGAGCTGTAATCCTAAACTGCTCATTGCTGATGAACCAACGA    550

BSNT_01903___    551 CAGCGCTGGACGTGACAATACAAGCCCAGGTGCTGGAGCTCATGAAAGAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    551 CAGCGCTGGACGTGACAATACAAGCCCAGGTGCTGGAGCTCATGAAAGAT    600

BSNT_01903___    601 CTCTGTCAGAAGTTCAATACATCGATTCTTCTCATCACACACGACTTAGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    601 CTCTGTCAGAAGTTCAATACATCGATTCTTCTCATCACACACGACTTAGG    650

BSNT_01903___    651 TGTCGTGTCTGAGGCTGCCGATAGAGTGATTGTCATGTACTGCGGACAAG    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU11360___ap    651 TGTCGTGTCTGAAGCTGCCGATAGAGTGATTGTCATGTACTGCGGACAAG    700

BSNT_01903___    701 TCGTAGAAAACGCTACAGTTGATGACTTATTTTTAGAACCGCTTCATCCG    750
                     |||||||||||||.||.|||||||||||||||||||||||||||||||||
BSU11360___ap    701 TCGTAGAAAACGCCACTGTTGATGACTTATTTTTAGAACCGCTTCATCCG    750

BSNT_01903___    751 TATACAGAAGGCCTGCTTACGTCAATTCCTGTTATAGATGGAGAGATTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    751 TATACAGAAGGCCTGCTTACGTCAATTCCTGTTATAGATGGAGAGATTGA    800

BSNT_01903___    801 TAAATTAAATGCAATTAAAGGCAGTGTGCCTACACCGGATAATCTGCCGC    850
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU11360___ap    801 TAAATTAAATGCGATTAAAGGCAGTGTGCCTACACCGGATAATCTGCCGC    850

BSNT_01903___    851 CGGGGTGCCGTTTTGCCCCAAGGTGCCCGAAAGCTATGGATAAGTGCTGG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    851 CGGGGTGCCGTTTTGCCCCAAGGTGCCCGAAAGCTATGGATAAGTGCTGG    900

BSNT_01903___    901 ACAAATCAGCCTTCGCTTTTGACACACAAAAGCGGAAGAACGGTGAGATG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11360___ap    901 ACAAATCAGCCTTCGCTTTTGACACACAAAAGCGGAAGAACGGTGAGATG    950

BSNT_01903___    951 CTTTTTATATGAGGAAGAGGGTGCCGAACAATCATGA    987
                     |||||||||||||||||||||||||||||||||||||
BSU11360___ap    951 CTTTTTATATGAGGAAGAGGGTGCCGAACAATCATGA    987


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