Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01917 and BSU11460

See Amino acid alignment / Visit BSNT_01917 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:16
# Commandline: needle
#    -asequence dna-align/BSNT_01917___oppD.1.22522.seq
#    -bsequence dna-align/BSU11460___oppD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01917___oppD-BSU11460___oppD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01917___oppD-BSU11460___oppD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01917___oppD
# 2: BSU11460___oppD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1077
# Identity:    1038/1077 (96.4%)
# Similarity:  1038/1077 (96.4%)
# Gaps:           9/1077 ( 0.8%)
# Score: 5070.0
# 
#
#=======================================

BSNT_01917___      1 ---------GTGACACGCCTATTAGAAGTAAAAGATTTAGCAATTTCATT     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU11460___op      1 GTGATACGGGTGACACGCCTATTAGAAGTAAAAGATTTAGCAATTTCATT     50

BSNT_01917___     42 TAAAACATATGGCGGAGAGGTTCAGGCGATCCGCGGAGTGAATTTCCATC     91
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU11460___op     51 TAAAACATATGGCGGAGAGGTCCAGGCGATCCGCGGAGTGAATTTCCATC    100

BSNT_01917___     92 TGGATAAAGGAGAGACACTGGCGATTGTTGGAGAATCAGGTTCCGGAAAA    141
                     ||||||||||.|||||.|||||.|||||||||||||||||||||||||||
BSU11460___op    101 TGGATAAAGGGGAGACGCTGGCCATTGTTGGAGAATCAGGTTCCGGAAAA    150

BSNT_01917___    142 AGTGTAACCTCTCAAGCGATTATGAAGCTGATTCCAATGCCTCCGGGTTA    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11460___op    151 AGTGTAACCTCTCAAGCGATTATGAAGCTGATTCCAATGCCTCCGGGTTA    200

BSNT_01917___    192 TTTCAAACGCGGTGAGATCCTGTTTGAAGGAAAGGATCTAGTGCCGCTGT    241
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU11460___op    201 TTTCAAACGCGGTGAGATCCTGTTTGAAGGAAAGGATCTGGTGCCGCTGT    250

BSNT_01917___    242 CCGAAAAAGAAATGCAAAATGTCCGGGGAAAAGAGATCGGCATGATATTC    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11460___op    251 CCGAAAAAGAAATGCAAAATGTCCGGGGAAAAGAGATCGGCATGATATTC    300

BSNT_01917___    292 CAAGATCCGATGACCTCATTAAATCCAACGATGAAAGTCGGTAAACAAAT    341
                     |||||||||||||||||.|||||||||||||||||.||||||||||||||
BSU11460___op    301 CAAGATCCGATGACCTCTTTAAATCCAACGATGAAGGTCGGTAAACAAAT    350

BSNT_01917___    342 TACGGAAGTGCTTTTTAAACACGAGAAAATCTCAAAGGAAGCGGCTAAAA    391
                     ||||||||||||||||||||||||.||.|||||.||||||||||||||||
BSU11460___op    351 TACGGAAGTGCTTTTTAAACACGAAAAGATCTCGAAGGAAGCGGCTAAAA    400

BSNT_01917___    392 AACGCGCGGTTGAACTGCTGGAATTAGTCGGTATCCCAATGCCGGAAAAG    441
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11460___op    401 AACGCGCGGTTGAACTGCTGGAATTAGTCGGTATCCCAATGCCGGAAAAG    450

BSNT_01917___    442 CGGGTGAACCAATTTCCGCACGAATTTTCAGGCGGGATGAGGCAGCGGGT    491
                     ||||||||||||||||||||.||||||||||||||||||||.|||.||||
BSU11460___op    451 CGGGTGAACCAATTTCCGCATGAATTTTCAGGCGGGATGAGACAGAGGGT    500

BSNT_01917___    492 TGTCATTGCCATGGCGCTTGCAGCGAATCCGAAGCTTCTGATCGCCGATG    541
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU11460___op    501 TGTCATTGCCATGGCGCTTGCAGCGAATCCGAAACTTCTGATCGCCGATG    550

BSNT_01917___    542 AGCCGACAACTGCACTTGATGTAACGATTCAAGCGCAAATTCTGGAATTG    591
                     |||||||||||||.|||||||||||||||||||||||||||.|||||||.
BSU11460___op    551 AGCCGACAACTGCTCTTGATGTAACGATTCAAGCGCAAATTTTGGAATTA    600

BSNT_01917___    592 ATGAAGGATTTGCAAAAGAAAATTGACACGTCCATCATCTTTATTACACA    641
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11460___op    601 ATGAAGGATTTGCAAAAGAAAATTGACACGTCCATCATCTTTATCACACA    650

BSNT_01917___    642 CGATCTTGGTGTTGTGGCAAATGTTGCTGACCGGGTCGCTGTCATGTACG    691
                     ||||||||||||||||||.||.||||||||||||||||||||||||||||
BSU11460___op    651 CGATCTTGGTGTTGTGGCTAACGTTGCTGACCGGGTCGCTGTCATGTACG    700

BSNT_01917___    692 CGGGACAGATTGTAGAAACTGGTACGGTAGACGAAATCTTCTACGATCCG    741
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU11460___op    701 CGGGACAGATTGTAGAAACTGGTACGGTAGACGAAATCTTCTACGACCCG    750

BSNT_01917___    742 AGACATCCGTACACTTGGGGGCTTCTTGCATCCATGCCGACACTGGAAAG    791
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11460___op    751 AGACATCCGTACACTTGGGGGCTTCTTGCATCCATGCCGACACTGGAAAG    800

BSNT_01917___    792 TTCAGGAGAGGAAGAGCTGACTGCCATTCCGGGCACACCGCCTGATTTGA    841
                     ||||||||||||||||||||||||.|||||||||||.|||||||||||||
BSU11460___op    801 TTCAGGAGAGGAAGAGCTGACTGCAATTCCGGGCACGCCGCCTGATTTGA    850

BSNT_01917___    842 CAAACCCGCCAAAAGGAGATGCTTTTGCCCTGCGGAGCCCTTATGCGATG    891
                     ||||||||||||||||||||||||||||||||||||||.||||.||||||
BSU11460___op    851 CAAACCCGCCAAAAGGAGATGCTTTTGCCCTGCGGAGCTCTTACGCGATG    900

BSNT_01917___    892 AAAATCGATTTTGAACAGGAGCCGCCAATGTTTAAGGTATCTGATACTCA    941
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU11460___op    901 AAAATCGATTTTGAACAGGAGCCGCCAATGTTTAAGGTATCCGATACTCA    950

BSNT_01917___    942 TTATGTCAAATCGTGGCTGCTTCATCCCGACGCGCCAAAGGTAGAGCCGC    991
                     ||||||.||||||||||||||||||||.||||||||||||||||||||||
BSU11460___op    951 TTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGC   1000

BSNT_01917___    992 CAGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAA   1041
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU11460___op   1001 CTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAA   1050

BSNT_01917___   1042 CCTGTCTTAGTGAGAGAAGGTGAATGA   1068
                     |||||||||||||||||||.|||||||
BSU11460___op   1051 CCTGTCTTAGTGAGAGAAGTTGAATGA   1077


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