Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01919 and BSU11480

See Amino acid alignment / Visit BSNT_01919 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:16
# Commandline: needle
#    -asequence dna-align/BSNT_01919___yjbB.1.22522.seq
#    -bsequence dna-align/BSU11480___yjbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01919___yjbB-BSU11480___yjbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01919___yjbB-BSU11480___yjbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01919___yjbB
# 2: BSU11480___yjbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1263
# Identity:    1202/1263 (95.2%)
# Similarity:  1202/1263 (95.2%)
# Gaps:          45/1263 ( 3.6%)
# Score: 5946.0
# 
#
#=======================================

BSNT_01919___      1 ATGATAACATTTACAATTAGAGGAAAAAAACGGAGGCGAAATACGATTCA     50
                                                                  |||||
BSU11480___yj      1 ---------------------------------------------ATTCA      5

BSNT_01919___     51 ATTTCTGCATAACAAAAATGTTTTTGCACTATTGCTGTCTCAATCTTTTC    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU11480___yj      6 ATTTCTGCATAACAAAAATGTTTTTGCGCTATTGCTGTCTCAATCTTTTC     55

BSNT_01919___    101 AATCTTTAGCAGGAGTCCTCGTCACAATCGTTTTAATGGTCCGGGTCTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11480___yj     56 AATCTTTAGCAGGAGTCCTCGTCACAATCGTTTTAATGGTCCGGATCTAT    105

BSNT_01919___    151 CAAATGACTGACTCTGTTTTTTTGGCGGGCCTTATTTTATCGTTCATGTC    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU11480___yj    106 CAAATGACTGACTCCGTTTTTTTGGCGGGCCTTATTTTATCGTTCATGTC    155

BSNT_01919___    201 GTTTGCGAGTATAGCAGCAAGCTTTTGCGTCTCTCCGGTGCTTCGCATTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    156 GTTTGCGAGTATAGCAGCAAGCTTTTGCGTCTCTCCGGTGCTTCGCATTC    205

BSNT_01919___    251 TCGGTTTTAAAAAGGTGCTTGTGGGAGCGAATCTGCTGAGAGCGGTCTTT    300
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU11480___yj    206 TCGGTTTTAAAAAGGTGCTTGCGGGAGCGAATCTGCTGAGAGCGGTCTTT    255

BSNT_01919___    301 ACAATCCTGATGGCATACAGCGTCACTCATCACGGACAGGCATTCTTTTG    350
                     |..||.||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    256 ATTATACTGATGGCATACAGCGTCACTCATCACGGACAGGCATTCTTTTG    305

BSNT_01919___    351 GATTACGCTGCTGTTTGTGTTTTGTTTTTCCTTCGCGGGCGCTTTTTTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    306 GATTACGCTGCTGTTTGTGTTTTGTTTTTCCTTCGCGGGCGCTTTTTTTC    355

BSNT_01919___    401 AGCCGGCAAGATTTGCGCTGCTGCCGATTATTGTTCCAAAGAAGCAATAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    356 AGCCGGCAAGATTTGCGCTGCTGCCGATTATTGTTCCAAAGAAGCAATAT    405

BSNT_01919___    451 GTAAAAGCGAATGGTGTGATCTCTCTCTCGAATCAATTATTCTTAACAGC    500
                     |||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU11480___yj    406 GTAAAAGCGAATGGTGTGATCTCCCTCTCGAATCAATTGTTCTTAACAGC    455

BSNT_01919___    501 AGGCTGGGGCCTTGGAGGCCTTCTGACGTACGCCGTCCCTTTTGAACTCA    550
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU11480___yj    456 AGGCTGGGGCCTTGGAGGCCTTCTGACGTACGCCGTCCCTTTTGAACTCG    505

BSNT_01919___    551 TTGTCGGCGCTGCTATTTGCCTGTTTGTTCTATCGGGAGCTTCCATCAGT    600
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU11480___yj    506 TTGTCGGCGCTGCCATTTGCCTGTTTGTTCTATCGGGAGCTTCCATCAGT    555

BSNT_01919___    601 GTGCTGCATGTAAATGAAGAAGAGGCTGTAGGAACTGCTGAAACAGCATC    650
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU11480___yj    556 GTGCTGCATGTAAATGAAGAAGAGGCTGCAGGAACTGCTGAAACAGCATC    605

BSNT_01919___    651 TGCCAGAAGTATATGGAAGGATTTAATGATCATCCCTATTGTAAGAGACA    700
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    606 TGTCAGAAGTATATGGAAGGATTTAATGATCATCCCTATTGTAAGAGACA    655

BSNT_01919___    701 TTACTGTAATGGACATGATAGAAGCTTTGGCGGGTTCCGTATGGTCATCT    750
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU11480___yj    656 TTACTGTAATGGACATGTTAGAAGCTTTGGCGGGTTCCGTATGGTCATCT    705

BSNT_01919___    751 GCTATTCTCCTCGCATTTACTGCGGCTGTTTTGCATGAAACAGAGGTGTG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    706 GCTATTCTCCTCGCATTTACTGCGGCTGTTTTGCATGAAACAGAGGTGTG    755

BSNT_01919___    801 GTGGGGGATGTTTAACGCTTCCTATTTTATAGGCGCAATTGTCGGCAGTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    756 GTGGGGGATGTTTAACGCTTCCTATTTTATAGGCGCAATTGTCGGCAGTG    805

BSNT_01919___    851 TGATTGCCATTCGTTTTTCTTCTTTTTTTGAGCGGAATATGGGCTATGCC    900
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    806 TGATTGCTATTCGTTTTTCTTCTTTTTTTGAGCGGAATATGGGCTATGCC    855

BSNT_01919___    901 ATTATGTTCAGCTCGCTTGTAATGTCGGCGCTGACCCTTTTGTTTTCATT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    856 ATTATGTTCAGCTCGCTTGTAATGTCGGCGCTGACCCTTTTGTTTTCATT    905

BSNT_01919___    951 TTCTCCAGTCCCATTTTTATGCGCTCTGGCTTGTGCTGCAATGGGGCCTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj    906 TTCTCCAGTCCCATTTTTATGCGCTCTGGCTTGTGCTGCAATGGGGCCTT    955

BSNT_01919___   1001 TTTATCAGGTGCGTGATATTTGCCAGGAAACCATGCTGCAGGAGGTTATT   1050
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11480___yj    956 TTTATCAGGTGCGTGATATTTGCCAGGAAACCATGCTGCAGGAAGTTATT   1005

BSNT_01919___   1051 CCCGAGCAGAAACGAATCGGAATCATGGCTGCAAAAAATGCGATTTTGAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj   1006 CCCGAGCAGAAACGAATCGGAATCATGGCTGCAAAAAATGCGATTTTGAC   1055

BSNT_01919___   1101 TCCTTGGTCAGGCGTCACCTACTCCATTATGGGGCTAGTGGCTGATGCTG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj   1056 TCCTTGGTCAGGCGTCACCTACTCCATTATGGGGCTAGTGGCTGATGCTG   1105

BSNT_01919___   1151 CTGGTGCGAAAATAGCTTTTATCGCGGCTGCTGCATTATATATCATGACA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj   1106 CTGGTGCGAAAATAGCTTTTATCGCGGCTGCTGCATTATATATCATGACA   1155

BSNT_01919___   1201 TTTCTGATTGCACTGGCGCAGCCCCGTCTGGTTCATTACAGGCGAGAAAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11480___yj   1156 TTTCTGATTGCACTGGCGCAGCCCCGTCTGGTTCATTACAGGCGAGAAAA   1205

BSNT_01919___   1251 TCGAGTTCAATGA   1263
                     |||||||||||||
BSU11480___yj   1206 TCGAGTTCAATGA   1218


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