Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01936 and BSU11570

See Amino acid alignment / Visit BSNT_01936 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence dna-align/BSNT_01936.1.22522.seq
#    -bsequence dna-align/BSU11570___yjbJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01936-BSU11570___yjbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01936-BSU11570___yjbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01936
# 2: BSU11570___yjbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 735
# Identity:     539/735 (73.3%)
# Similarity:   539/735 (73.3%)
# Gaps:         189/735 (25.7%)
# Score: 2667.0
# 
#
#=======================================

BSNT_01936         1 GTGAATGTAACGAATTGGGCAGCTTTACTTCAGCTTCAGGCACTACAGTC     50
                                                                       
BSU11570___yj      0 --------------------------------------------------      0

BSNT_01936        51 CATATCTAATGCACGCAGCAGCTCGGACACTCAGAATACGGAAAGCCCGC    100
                                                                       
BSU11570___yj      0 --------------------------------------------------      0

BSNT_01936       101 TTTCAAGTTTTAGCTCTTTGCTCAGCCAATATACAAACGGTCTGACATCT    150
                                                                       
BSU11570___yj      0 --------------------------------------------------      0

BSNT_01936       151 CAGCAATCAGCACTTTCTTCATCGCCAAGCCCGCTCAGCATGCTGAACAG    200
                                                            |||||||||||
BSU11570___yj      1 ---------------------------------------ATGCTGAACAG     11

BSNT_01936       201 CGCGAATACAACAGCGCCGTCACTGCTTTCAGCGTATGGGCTTAACTCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj     12 CGCGAATACAACAGCGCCGTCACTGCTTTCAGCGTATGGGCTTAACTCAT     61

BSNT_01936       251 ATACGAGCAGCAATTCAAGTTCAGTCACAAAAGCGGCAGAAAGCACTGAA    300
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU11570___yj     62 ATACGAGCAGCAATTCAGGTTCAGTCACAAAAGCGGCAGAAAGCACTGAA    111

BSNT_01936       301 ACAGCTGCTGCAGATTCAGCTTCAAACAAACATGAAGCAAATCAGATCAG    350
                     |||||||.||||||||||||||||||||||||||||||||||||||||.|
BSU11570___yj    112 ACAGCTGTTGCAGATTCAGCTTCAAACAAACATGAAGCAAATCAGATCCG    161

BSNT_01936       351 TTCGGGAGACTTCTCTATTGACAGTGCGATTAAAAAAGCCGCTGATAAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj    162 TTCGGGAGACTTCTCTATTGACAGTGCGATTAAAAAAGCCGCTGATAAAT    211

BSNT_01936       401 ATGGCGTTGATGAAAAACTGATCCGTGCCGTCATCAAACAGGAATCAGGC    450
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU11570___yj    212 ATGGCGTTGATGAAAAACTGATCCGCGCCGTCATCAAACAGGAATCAGGC    261

BSNT_01936       451 TTTAATGCAAAAGCGGTCAGCGGAGCAGGTGCGATGGGCCTCATGCAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj    262 TTTAATGCAAAAGCGGTCAGCGGAGCAGGTGCGATGGGCCTCATGCAGCT    311

BSNT_01936       501 GATGCCGTCAACAGCAAGCTCACTTGGCGTTTCCAATCCGCTTGATCCGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj    312 GATGCCGTCAACAGCAAGCTCACTTGGCGTTTCCAATCCGCTTGATCCGC    361

BSNT_01936       551 AGCAAAATGTGGAGGGCGGAACGAAATATTTAAAACAAATGCTGGATAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj    362 AGCAAAATGTGGAGGGCGGAACGAAATATTTAAAACAAATGCTGGATAAA    411

BSNT_01936       601 TACGGCGGCAATGTGTCTATGGCATTAGCGGCTTACAACGCCGGACCGGG    650
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU11570___yj    412 TACGACGGCAATGTGTCTATGGCATTAGCGGCTTACAACGCCGGACCGGG    461

BSNT_01936       651 GAATGTTGACCGATACGGAGGCATTCCTCCTTTCCAAGAAACGAAAAACT    700
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11570___yj    462 GAATGTTGACCGATACGGAGGCATTCCTCCTTTCCAAGAAACGCAAAACT    511

BSNT_01936       701 ATGTAAAAAAAATAACTTCAGCTTATTACGCGTAA    735
                     |||||||||||||||||||||.|||||||||||||
BSU11570___yj    512 ATGTAAAAAAAATAACTTCAGTTTATTACGCGTAA    546


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