Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01942 and BSU11610

See Amino acid alignment / Visit BSNT_01942 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence dna-align/BSNT_01942___ppnK.1.22522.seq
#    -bsequence dna-align/BSU11610___yjbN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01942___ppnK-BSU11610___yjbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01942___ppnK-BSU11610___yjbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: BSU11610___yjbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity:     800/801 (99.9%)
# Similarity:   800/801 (99.9%)
# Gaps:           0/801 ( 0.0%)
# Score: 3996.0
# 
#
#=======================================

BSNT_01942___      1 ATGAAATTTGCCGTATCATCAAAAGGAGATCAAGTTTCTGATACGCTGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj      1 ATGAAATTTGCCGTATCATCAAAAGGAGATCAAGTTTCTGATACGCTGAA     50

BSNT_01942___     51 AAGCAAAATACAGGCGTATTTATTGGATTTTGATATGGAACTGGATGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj     51 AAGCAAAATACAGGCGTATTTATTGGATTTTGATATGGAACTGGATGAAA    100

BSNT_01942___    101 ATGAACCGGAAATCGTTATTTCAGTCGGAGGCGACGGAACGCTTTTGTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    101 ATGAACCGGAAATCGTTATTTCAGTCGGAGGCGACGGAACGCTTTTGTAT    150

BSNT_01942___    151 GCTTTTCACAGATACAGCGACCGCTTGGACAAAACAGCATTTGTCGGCGT    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU11610___yj    151 GCTTTTCACAGATACAGCGACCGTTTGGACAAAACAGCATTTGTCGGCGT    200

BSNT_01942___    201 TCACACAGGTCATCTGGGTTTTTATGCCGACTGGGTTCCTCATGAAATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    201 TCACACAGGTCATCTGGGTTTTTATGCCGACTGGGTTCCTCATGAAATTG    250

BSNT_01942___    251 AAAAACTTGTTCTTGCCATCGCGAAAACGCCGTATCATACAGTCGAATAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    251 AAAAACTTGTTCTTGCCATCGCGAAAACGCCGTATCATACAGTCGAATAT    300

BSNT_01942___    301 CCGCTTCTCGAAGTCATTGTGACCTATCACGAAAACGAGCGGGAAGAAAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    301 CCGCTTCTCGAAGTCATTGTGACCTATCACGAAAACGAGCGGGAAGAAAG    350

BSNT_01942___    351 ATACTTAGCTTTGAATGAATGTACGATTAAAAGCATCGAAGGAAGCCTTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    351 ATACTTAGCTTTGAATGAATGTACGATTAAAAGCATCGAAGGAAGCCTTG    400

BSNT_01942___    401 TTGCTGATGTGGAAATCAAAGGGCAGCTCTTTGAAACCTTCCGGGGCGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    401 TTGCTGATGTGGAAATCAAAGGGCAGCTCTTTGAAACCTTCCGGGGCGAC    450

BSNT_01942___    451 GGCCTCTGCCTGTCAACTCCATCAGGCAGCACAGCCTACAATAAGGCGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    451 GGCCTCTGCCTGTCAACTCCATCAGGCAGCACAGCCTACAATAAGGCGCT    500

BSNT_01942___    501 GGGCGGAGCGATTATCCATCCGTCTATCAGGGCGATCCAGCTTGCGGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    501 GGGCGGAGCGATTATCCATCCGTCTATCAGGGCGATCCAGCTTGCGGAAA    550

BSNT_01942___    551 TGGCTTCAATTAATAACCGCGTGTTCCGTACGGTCGGGTCACCTCTGCTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    551 TGGCTTCAATTAATAACCGCGTGTTCCGTACGGTCGGGTCACCTCTGCTT    600

BSNT_01942___    601 CTCCCATCCCATCATGATTGCATGATTAAGCCGAGAAACGAAGTTGACTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    601 CTCCCATCCCATCATGATTGCATGATTAAGCCGAGAAACGAAGTTGACTT    650

BSNT_01942___    651 TCAAGTGACGATTGACCATTTAACCCTTCTCCATAAGGATGTAAAGTCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    651 TCAAGTGACGATTGACCATTTAACCCTTCTCCATAAGGATGTAAAGTCGA    700

BSNT_01942___    701 TCCGCTGCCAAGTTGCATCCGAAAAAGTGCGGTTTGCGAGATTCCGTCCG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    701 TCCGCTGCCAAGTTGCATCCGAAAAAGTGCGGTTTGCGAGATTCCGTCCG    750

BSNT_01942___    751 TTTCCATTTTGGAAAAGAGTCCAGGATTCGTTTATTGGAAAAGGTGAATA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11610___yj    751 TTTCCATTTTGGAAAAGAGTCCAGGATTCGTTTATTGGAAAAGGTGAATA    800

BSNT_01942___    801 G    801
                     |
BSU11610___yj    801 G    801


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