Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01986 and BSU11900

See Amino acid alignment / Visit BSNT_01986 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:23
# Commandline: needle
#    -asequence dna-align/BSNT_01986___yjcL.1.22522.seq
#    -bsequence dna-align/BSU11900___yjcL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01986___yjcL-BSU11900___yjcL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01986___yjcL-BSU11900___yjcL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01986___yjcL
# 2: BSU11900___yjcL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity:    1162/1191 (97.6%)
# Similarity:  1162/1191 (97.6%)
# Gaps:           0/1191 ( 0.0%)
# Score: 5694.0
# 
#
#=======================================

BSNT_01986___      1 TTGCATTCTTTGATTTCTTCTGATGACGCATGGGTATTGTGGGGGTTTAT     50
                     ||||||||||||||||||||||||||.|.|||||||||.|||||||||||
BSU11900___yj      1 TTGCATTCTTTGATTTCTTCTGATGATGTATGGGTATTATGGGGGTTTAT     50

BSNT_01986___     51 TGCGGTGTGGGCGGCAGTGAGCATCGGGCTGGAGCAGCGCTTTAAGTGGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj     51 TGCGGTGTGGGCGGCAGTGAGCATCGGGCTGGAGCAGCGCTTTAAGTGGG    100

BSNT_01986___    101 CGTCCGCTGTGTCGGGTGCTATTATCGCGCTGGCAGGTGCTATGGTGTTT    150
                     ||||.|||||||||||.|||||||||||.||.||||||||||||||||||
BSU11900___yj    101 CGTCTGCTGTGTCGGGCGCTATTATCGCCCTTGCAGGTGCTATGGTGTTT    150

BSNT_01986___    151 ACAAATGTAGGAGTGCTTCCTGTTGAGTCGCCTGTGTATGATACTGTGTG    200
                     ||||||||||||||||||||||||||||||||.||||||||.||||||||
BSU11900___yj    151 ACAAATGTAGGAGTGCTTCCTGTTGAGTCGCCCGTGTATGACACTGTGTG    200

BSNT_01986___    201 GTCTTATGTGGTGCCGCTGGCGATACCACTTTTATTGTTTCAGATCAATG    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU11900___yj    201 GTCTTATGTGGTACCGCTGGCGATACCACTTTTATTGTTTCAGATCAATG    250

BSNT_01986___    251 TTCGGCAAATTTTTAAGGAAAGCAGGCGTTTGCTGTTTATTTTTCTGATT    300
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    251 TTAGGCAAATTTTTAAGGAAAGCAGGCGTTTGCTGTTTATTTTTCTGATT    300

BSNT_01986___    301 AGCTCCGCTGGCACTGTCCTTGGGAGCATTCTAGCTTTTTTTCTTCTCAA    350
                     |||||||.|||.||.||.|||||.||.||.||.|||||||||||.|||||
BSU11900___yj    301 AGCTCCGTTGGAACAGTGCTTGGCAGTATCCTGGCTTTTTTTCTACTCAA    350

BSNT_01986___    351 ACAGCATATTCCTTATCTCGATAAAATCGGCGGGATGATCAGCGCCTCTT    400
                     |||||||||||||||..|.|||||||||||.|||||||||||||||||||
BSU11900___yj    351 ACAGCATATTCCTTACTTAGATAAAATCGGTGGGATGATCAGCGCCTCTT    400

BSNT_01986___    401 ATATCGGCGGCGGGGTCAACTTTGCGGCGATGGCGGCAAAATTTGAGACG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    401 ATATCGGCGGCGGGGTCAACTTTGCGGCGATGGCGGCAAAATTTGAGACG    450

BSNT_01986___    451 CCTGGTGAATATGTGTCGGCTACCGTTGTGGCTGATAATTTTATGATGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    451 CCTGGTGAATATGTGTCGGCTACCGTTGTGGCTGATAATTTTATGATGGC    500

BSNT_01986___    501 GCTTTTGTTTTTTATTTTAATCAGCATTCCTGCACTCAAATGGTTTCAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    501 GCTTTTGTTTTTTATTTTAATCAGCATTCCTGCACTCAAATGGTTTCAGC    550

BSNT_01986___    551 GGCATTATGCCATGCCGTTTGAAGAGAAGGTAAAAGCCGATGAAAACAGC    600
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11900___yj    551 GGCATTATGCCATGCCGTTTGAAGAGAAGGTAAAAGCCGATGGAAACAGC    600

BSNT_01986___    601 GGAAACAGTGCTGAAAGCTATTGGAAACGGAAGGATATTTCCTTAAAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    601 GGAAACAGTGCTGAAAGCTATTGGAAACGGAAGGATATTTCCTTAAAGGA    650

BSNT_01986___    651 TATCGCTTTTAATGCCGGTGCCGCTTTCGCACTTGTTGCGGTTAGTATGA    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU11900___yj    651 TATCGCTTTTAATGCCGGTGCCGCTTTCGCGCTTGTTGCGGTTAGTATGA    700

BSNT_01986___    701 AGGTTTCCGGTTATTTTAAAAGCATTTTTTCTCATCCCCTGCTGACCGGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    701 AGGTTTCCGGTTATTTTAAAAGCATTTTTTCTCATCCCCTGCTGACCGGT    750

BSNT_01986___    751 ACGCTTGGCGATCAGTACCTGGTGCTTACGTCTTTAACTGTTCTTATCAT    800
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU11900___yj    751 ACGCTTGGCGATCAGTACCTGGTTCTTACGTCTTTAACTGTTCTTATCAT    800

BSNT_01986___    801 TTTTCTTTTCCCGCGTTTTTTTGAAAGGCTCAATGGATCTCAGGAGCTTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    801 TTTTCTTTTCCCGCGTTTTTTTGAAAGGCTCAATGGATCTCAGGAGCTTG    850

BSNT_01986___    851 GAACCTTTTTGATTTATTTGTTTTTTGTGGTGATCGGCATTCCTGCAGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    851 GAACCTTTTTGATTTATTTGTTTTTTGTGGTGATCGGCATTCCTGCAGAT    900

BSNT_01986___    901 CTCCGCTTAATCGTCACGAATGCGCCTCTTATTCTATTATTCGTGTTTAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    901 CTCCGCTTAATCGTCACGAATGCGCCTCTTATTCTATTATTCGTGTTTAT    950

BSNT_01986___    951 CATTGCGATTAGCAATTTAGCGGTTTCCTTAGCTGCCGGAAAATTGTTCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj    951 CATTGCGATTAGCAATTTAGCGGTTTCCTTAGCTGCCGGAAAATTGTTCC   1000

BSNT_01986___   1001 GTGTGCGGCTTGAAGAAATTCTGCTCGCCGTCAATGCTACTGTCGGGGGA   1050
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU11900___yj   1001 GTGTGCGGCTTGAAGAAATTCTGCTCGCCGTCAACGCTACTGTCGGGGGA   1050

BSNT_01986___   1051 CCGACGACTGCGGCTGCGATGGCAATTGCCAAGGGATGGCGGGATCTTGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11900___yj   1051 CCGACGACTGCGGCTGCGATGGCAATTGCCAAGGGATGGCGGGAGCTTGT   1100

BSNT_01986___   1101 CGCCCCGATCATGCTTGTCGGTACGCTCGGCTACTTAATCGGCAACTATG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11900___yj   1101 CGCCCCGATCATGCTTGTCGGTACGCTCGGCTACTTAATCGGCAACTATG   1150

BSNT_01986___   1151 TTGGCACTTTTATGGGAAATTGGTTTTCTTCCTTCTTATAA   1191
                     |||||||||||||||||||||||||||||||||||||||||
BSU11900___yj   1151 TTGGCACTTTTATGGGAAATTGGTTTTCTTCCTTCTTATAA   1191


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