Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02055 and BSU12110

See Amino acid alignment / Visit BSNT_02055 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence dna-align/BSNT_02055___yjfA.1.22522.seq
#    -bsequence dna-align/BSU12110___yjfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02055___yjfA-BSU12110___yjfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02055___yjfA-BSU12110___yjfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02055___yjfA
# 2: BSU12110___yjfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     469/474 (98.9%)
# Similarity:   469/474 (98.9%)
# Gaps:           0/474 ( 0.0%)
# Score: 2325.0
# 
#
#=======================================

BSNT_02055___      1 TTGAAAAGACTGTTTATGAAGGCTTCATTGGTGTTATTCGCAGTAGTATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj      1 TTGAAAAGACTGTTTATGAAGGCTTCATTGGTGTTATTCGCAGTAGTATT     50

BSNT_02055___     51 TGTTTTTGCCGTCAAAGGTGCACCCGCCAAGGCGGAAACCCATGCCTACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj     51 TGTTTTTGCCGTCAAAGGTGCACCCGCCAAGGCGGAAACCCATGCCTACG    100

BSNT_02055___    101 ATGGAAAAAGCCCTTATTACAATGATTGTGCGTCCACCGGCTCTACAAAA    150
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12110___yj    101 ATGGAAAAAGCCCTTATTACAATGATTGTGCGTCCAGCGGCTCTACAAAA    150

BSNT_02055___    151 AAATCCTCAAACTTAGTGAATGCCAGCAATCAAGTCATCGGAGTAGTCGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj    151 AAATCCTCAAACTTAGTGAATGCCAGCAATCAAGTCATCGGAGTAGTCGA    200

BSNT_02055___    201 GCTTAAATTCAGCAGTACATGTAAAACGGCTTGGGCAAAAATCACGATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj    201 GCTTAAATTCAGCAGTACATGTAAAACGGCTTGGGCAAAAATCACGATGA    250

BSNT_02055___    251 ATAATACATTGACGTCTGGCTTTGAAGCAAATGCGGAGATTACCCGAAAC    300
                     |||||||||||||||||||||.||||||||||||||||||||||||.|||
BSU12110___yj    251 ATAATACATTGACGTCTGGCTATGAAGCAAATGCGGAGATTACCCGGAAC    300

BSNT_02055___    301 ACGGACGGAAAGAGATATAATTGTGATTCTGCAGGCGGCAATGGAAAAGC    350
                     ||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU12110___yj    301 ACAGACGGAAAAAGATATAATTGTGATTCTGCAGGCGGCAATGGAAAAGC    350

BSNT_02055___    351 GGTGGCCGGCCAAAAGTCTTGCTATACACCGATGGTATATGATTTAGATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj    351 GGTGGCCGGCCAAAAGTCTTGCTATACACCGATGGTATATGATTTAGATC    400

BSNT_02055___    401 CAAGGACTTCTTACGCTTTCGGCAAGTATTCAGGACCAAACTTAAATGTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12110___yj    401 CAAGGACTTCTTACGCTTTCGGCAAGTATTCAGGACCAAACTTAAATGTT    450

BSNT_02055___    451 TGGGCCACCACAGGCTCTTATTAA    474
                     ||||||||||||||||||||||||
BSU12110___yj    451 TGGGCCACCACAGGCTCTTATTAA    474


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