Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02056 and BSU12120

See Amino acid alignment / Visit BSNT_02056 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence dna-align/BSNT_02056___yjfB.1.22522.seq
#    -bsequence dna-align/BSU12120___yjfB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02056___yjfB-BSU12120___yjfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02056___yjfB-BSU12120___yjfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02056___yjfB
# 2: BSU12120___yjfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     164/168 (97.6%)
# Similarity:   164/168 (97.6%)
# Gaps:           0/168 ( 0.0%)
# Score: 804.0
# 
#
#=======================================

BSNT_02056___      1 ATGGATATCCCTGCTTTATCGGTTGCGATGCATCAAGCATCCCTTGCCCA     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU12120___yj      1 ATGGATATTCCTGCTTTATCGGTTGCGATGCATCAAGCATCCCTTGCCCA     50

BSNT_02056___     51 GAATGTAAATATTGCTTTAACGAAAAAAATGCTGGACACCGCCCAGCAAA    100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU12120___yj     51 GAATGTAAATATTGCTTTAACGAAAAAAAGGCTGGACACCGCCCAGCAAA    100

BSNT_02056___    101 ATGCCGATCAAACCTTAAAGATGATTCAACATCCGACTCTCGGGCAAACC    150
                     ||||||||||||||||||||||||||||||||||.||||||||.||||||
BSU12120___yj    101 ATGCCGATCAAACCTTAAAGATGATTCAACATCCAACTCTCGGACAAACC    150

BSNT_02056___    151 ATTGATGTAAAAGCATAA    168
                     ||||||||||||||||||
BSU12120___yj    151 ATTGATGTAAAAGCATAA    168


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.