Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02064 and BSU12160

See Amino acid alignment / Visit BSNT_02064 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:26
# Commandline: needle
#    -asequence dna-align/BSNT_02064.1.22522.seq
#    -bsequence dna-align/BSU12160___yjgC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02064-BSU12160___yjgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02064-BSU12160___yjgC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02064
# 2: BSU12160___yjgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2958
# Identity:    1427/2958 (48.2%)
# Similarity:  1427/2958 (48.2%)
# Gaps:        1500/2958 (50.7%)
# Score: 7011.0
# 
#
#=======================================

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj      1 ATGGCTGGCAAGAAAACAATCACAATAAACGGCGTTGAAATGGAAGCGTC     50

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj     51 CGAGGAACAGACGGTGCTGCAGCTTTTGAATAACAGCTCGATTGAAGTGC    100

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    101 CGCAAGTTTGCTATCATCCAAGCTTAGGGCCGATTGAGACATGTGATACG    150

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    151 TGCATCGTCAGCATCAATGGTGAGCTGAAGAGGTCGTGCTCCGCTGAATT    200

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    201 AAAGGATGGGGATGTCATTGATACGCTCTCACCTGACGTGAAAAAAGCGC    250

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    251 AGGTCATCGGGATGGACAAGATTTTATATAATCATGAGCTTTATTGTACA    300

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    301 GTTTGCGATTACAACAATGGGGGATGCGAAATACATAATACGGTGAAGGA    350

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    351 AATGAAAATCAATCACCAAAGCATTCCGTTTGATCACAAGCCATACCATA    400

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    401 AGGATGAATCCCATCCGTTTTATCGGTATGATCCAGATCAATGTATATTG    450

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    451 TGCGGACGCTGTGTTGAGGCATGCCAAGACGTTCAGGTAACTGAAACGCT    500

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    501 GACCATTGACTGGGAGCGGAAACGCCCGCGCGTCATTTGGGATAACGACG    550

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    551 TGCCGATCAATGAGTCGTCATGTGTGTCATGCGGCCATTGTTCAACGGTC    600

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    601 TGTCCGTGCAACGCGATGATGGAAAAAGGAATGGAAGGGGAAGCCGGATA    650

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    651 TTTAACAGGCATCAATAACGAAACGCTGCGACCGATGATCGAGATCACGA    700

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    701 AAGGCGTAGAGACAGGCTACGGCTCGATTCTCGCGATTTCTGATATGGAA    750

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    751 TCGGCCATGCGTGATGAACGAATCAAAAAAACGAAAACCGTCTGCACGTA    800

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    801 TTGCGGCGTCGGCTGCAGCTTTGATGTCTGGACAAAGGGCAGAGACATTC    850

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    851 TGAAAGTAGAGCCGCAGGAGGAAGCGCCTGCCAACGGCATTTCTACTTGT    900

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    901 GTGAAAGGCAAGTTCGGCTGGGATTTCGTTAACAGCGAAGAACGCCTGAC    950

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj    951 AAAGCCGCTGATCCGTGAAGGCGATCATTTCCGTGAAGCAGAGTGGGAGG   1000

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1001 AGGCGTTATTGCTGATCGCCAGCAAGTTCACTGAATTAAAAGAGGCGTTT   1050

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1051 GGCCCGGATTCTCTCGCTTTTATTACATCTTCTAAATGTACAAATGAAGA   1100

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1101 ATCCTATCTTATGCAAAAGCTGGCCAGAGGGGTCATTGGCACAAATAATG   1150

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1151 TGGACAACTGCTCTCGCTATTGCCAATCTCCTGCGACTGCCGGCCTGTTC   1200

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1201 CGGACAGTCGGCTATGGCGGTGATTCAGGATCAATTACAGATATCGCGCA   1250

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1251 AGCGGACCTTGTTTTGATTATCGGTTCGAACACGTCTGAGTCGCATCCAG   1300

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1301 TCTTATCCACTCGGATTAAACGGGCTCATAAGCTGAGAGGGCAGAAAGTG   1350

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1351 ATCGTCGCGGATATCAGAAAGCACGAAATGGCAGAGCGCTCAGATTTATT   1400

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1401 TGTCCAGCCGCGTGCCGGATCGGATATCGTCTGGCTGAATGCGATCGCCA   1450

BSNT_02064         0 --------------------------------------------------      0
                                                                       
BSU12160___yj   1451 AATATTTAATAGAAAACGGCAAGGCCGATGAACGATTTTTGAGAGAAAGA   1500

BSNT_02064         1 GTGAACGGACGGCATGAATATGTAAAAAGCATCGCGCCGTACACACTTGA     50
                     ||||||||||||.|||||||||||||||||.|||||||||||||||||||
BSU12160___yj   1501 GTGAACGGACGGGATGAATATGTAAAAAGCCTCGCGCCGTACACACTTGA   1550

BSNT_02064        51 ATATGCTGAGGAGAAAACCGGGATTGATCAAGAAACCCTTATCCAAATGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   1551 ATATGCTGAGGAGAAAACCGGGATTGATCAAGAAACCCTTATCCAAATGG   1600

BSNT_02064       101 CAGAGATGATCGGGCAAGCTGACAGTGTGTGCGCATTGTGGGCGATGGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   1601 CAGAGATGATCGGGCAAGCTGACAGTGTGTGCGCATTGTGGGCGATGGGC   1650

BSNT_02064       151 GTGACACAGCACATTGGAGGAAGCGACACGAGCACGGCGATCTCTAACCT    200
                     |||||||||||.|||||||||||||||||||||||||||||||||||.||
BSU12160___yj   1651 GTGACACAGCATATTGGAGGAAGCGACACGAGCACGGCGATCTCTAATCT   1700

BSNT_02064       201 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCAGGTTCTTACCCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   1701 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCAGGTTCTTACCCAT   1750

BSNT_02064       251 TGCGCGGTCATAATAACGTGCAGGGAGCAAGTGACTTCGGAAGTATGCCT    300
                     |||||||.|||||.|||||||||||||||||||||||.||.|||||||||
BSU12160___yj   1751 TGCGCGGCCATAACAACGTGCAGGGAGCAAGTGACTTTGGGAGTATGCCT   1800

BSNT_02064       301 GACAGAATGCCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA    350
                     ||||||.|.|||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   1801 GACAGACTACCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA   1850

BSNT_02064       351 ATACGAGCAGGCGTGGGGCGTGCCGCTGCCGAAGAAGCCGGGTATGACCA    400
                     ||||||||..|.||||||.|||||||||||||||.|||||||||||||||
BSU12160___yj   1851 ATACGAGCGTGTGTGGGGTGTGCCGCTGCCGAAGGAGCCGGGTATGACCA   1900

BSNT_02064       401 ACCACGAAATGATTGAAAAAATACATTCCGGACAGCTGAAAGCGATGTAT    450
                     ||||||||||||||||||||||.||||||||||||.||||||||||||||
BSU12160___yj   1901 ACCACGAAATGATTGAAAAAATCCATTCCGGACAGTTGAAAGCGATGTAT   1950

BSNT_02064       451 GTAAAAGGTGAAGAAATGGGCTTGGTGGATTCCAACATCAATCATGTACA    500
                     |||||||||||||||||||||.|.||.||.|||||.||||||||||||||
BSU12160___yj   1951 GTAAAAGGTGAAGAAATGGGCCTTGTCGACTCCAATATCAATCATGTACA   2000

BSNT_02064       501 CGCCGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGACATTTTCCTTT    550
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2001 CGCTGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGACATTTTCCTTT   2050

BSNT_02064       551 CACGTACAGCGGAGTTTGCTGATGTGGTTCTTCCTGCGAGCCCAAGCCTT    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU12160___yj   2051 CACGTACAGCGGAGTTTGCTGATGTGGTTCTTCCTGCGAGCCCGAGCCTT   2100

BSNT_02064       601 GAAAAAGAAGGAACCTTTACAAACACAGAACGCCGGATTCAGCGTTTGTA    650
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU12160___yj   2101 GAAAAAGAAGGAACGTTTACAAACACAGAACGCCGGATTCAGCGTTTGTA   2150

BSNT_02064       651 TCAGGTATTTGAACCGCTGGGTGAATCAAAGCTGGATTGGCAGATTATTA    700
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12160___yj   2151 TCAGGTATTTGAACCGCTGGGTGAATCAAAGCCGGATTGGCAGATTATTA   2200

BSNT_02064       701 TGGAGGTTGCCAATAAGCTTGGCGCCGGTTGGCACTATGAGCATCCTGCA    750
                     ||||||||||||||||||||||||||||.||||.||||||||||||||||
BSU12160___yj   2201 TGGAGGTTGCCAATAAGCTTGGCGCCGGCTGGCTCTATGAGCATCCTGCA   2250

BSNT_02064       751 GACATTATGGAGGAAGCAGCCAAGCTGTCGCCGATTTATGCCGGTGTCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2251 GACATTATGGAGGAAGCAGCCAAGCTGTCGCCGATTTATGCCGGTGTCAC   2300

BSNT_02064       801 CTATAAACGTCTTGAGGGCTATCATTCCCTGCAATGGCCTGTAAACGCTG    850
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU12160___yj   2301 CTATGAACGTCTTGAGGGCTATAATTCCCTGCAATGGCCTGTAAACGCTG   2350

BSNT_02064       851 ATGGAAAGGATTCGCCTTTACTCTTTACAGAGCGCTTCCCTTTCCCGGAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12160___yj   2351 ATGGAAAGGATTCGCCTTTACTCTTTACAGAGCGCTTCCCTTTCCCAGAC   2400

BSNT_02064       901 GGCAAGGCCATTCTCTACCCTGTCCAGTGGACAGAGCCTAAGGAATTCGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2401 GGCAAGGCCATTCTCTACCCTGTCCAGTGGACAGAGCCTAAGGAATTCGG   2450

BSNT_02064       951 TGAGGAATATGATATCCATGTCAACAATGGGCGGCTCTTGGAGCACTTCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2451 TGAGGAATATGATATCCATGTCAACAATGGGCGGCTCTTGGAGCACTTCC   2500

BSNT_02064      1001 ACGAAGGGAACCTGACTTACAAATCAAAAGGGATTTCGGAGAAAACACCG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2501 ACGAAGGGAACCTGACTTACAAATCAAAAGGGATTTCGGAGAAAACACCG   2550

BSNT_02064      1051 GAAGTGTTCTTAGAAATTTCTCCTGAGCTTGCGGCAGAACGAGGGATTCA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2551 GAAGTGTTCTTAGAAATTTCTCCTGAGCTTGCGGCAGAACGAGGGATTCA   2600

BSNT_02064      1101 GGACGGAACCCTCGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2601 GGACGGAACCCTCGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA   2650

BSNT_02064      1151 AGTGCCTGATTACTGATCGAGTCAAAGGGAAGGAAGTATATCTGCCAATG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2651 AGTGCCTGATTACTGATCGAGTCAAAGGGAAGGAAGTATATCTGCCAATG   2700

BSNT_02064      1201 AACGATTCAGGGGAAGCGGCGATCAACCTGTTAACAGGCAGCCATGCCGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2701 AACGATTCAGGGGAAGCGGCGATCAACCTGTTAACAGGCAGCCATGCCGA   2750

BSNT_02064      1251 TAAGGATACCGATACGCCTGCTTACAAAGAAACATCGGCCAAGATGGAAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2751 TAAGGATACCGATACGCCTGCTTACAAAGAAACATCGGCCAAGATGGAAA   2800

BSNT_02064      1301 TTTTGAAGCACGACGGAATCAGCCCGCTGCCTAAGATCAACCACCGCAAC   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2801 TTTTGAAGCACGACGGAATCAGCCCGCTGCCTAAGATCAACCACCGCAAC   2850

BSNT_02064      1351 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCG   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2851 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCG   2900

BSNT_02064      1401 GAAGGATTATATTTTCCCTGGTGACGCTGTGAAAAGGGGGATGGGCCATA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj   2901 GAAGGATTATATTTTCCCTGGTGACGCTGTGAAAAGGGGGATGGGCCATA   2950

BSNT_02064      1451 ATGGCTAA   1458
                     ||||||||
BSU12160___yj   2951 ATGGCTAA   2958


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