Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02079 and BSU12260

See Amino acid alignment / Visit BSNT_02079 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence dna-align/BSNT_02079___yjlA.1.22522.seq
#    -bsequence dna-align/BSU12260___yjlA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02079___yjlA-BSU12260___yjlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02079___yjlA-BSU12260___yjlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02079___yjlA
# 2: BSU12260___yjlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 975
# Identity:     956/975 (98.1%)
# Similarity:   956/975 (98.1%)
# Gaps:           0/975 ( 0.0%)
# Score: 4704.0
# 
#
#=======================================

BSNT_02079___      1 ATGAAAGCTATCGTTATCGGAATATTGGCTTCACTTTTTTTCGCCGTTAC     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12260___yj      1 ATGAAAGCTATCGTTATCGGAATATTGGCTTCACTCTTTTTCGCCGTTAC     50

BSNT_02079___     51 CTTTATATTAAACAGAGCGATGGAGTTATCAGGAGGCAGCTGGCTTTGGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj     51 CTTTATATTAAACAGAGCGATGGAGTTATCAGGAGGCAGCTGGCTTTGGA    100

BSNT_02079___    101 GCTCTTCGCTGCGCTTTATTTTTATGGTGCCGTTTTTATGTTTGATTGTC    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU12260___yj    101 GCTCTTCGCTGCGCTTTATTTTTATGGTGCCATTTTTATGTTTGATTGTC    150

BSNT_02079___    151 ATCATGAGAGGGACATTCACGCCTCTCTTACTAGAGATGAGGAAAAAGCC    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12260___yj    151 ATCATGAGAGGGACATTCACGCCTCTCTTACTAGAAATGAGGAAAAAGCC    200

BSNT_02079___    201 GTTTTATTGGATCAAATGGAGCTTCGTCGGCTTCGTGCTTTTTTACGCGC    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||.|
BSU12260___yj    201 GTTTTATTGGATCAAATGGAGCTTCGTCGGTTTCGTGCTTTTTTACGCAC    250

BSNT_02079___    251 CGATTACATTTGCGGCTGCATACGGTCCGGGGTGGCTCATAGCCGGAACC    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU12260___yj    251 CGATTACATTTGCGGCTGCATACGGTCCGGGGTGGCTCATAGCTGGAACC    300

BSNT_02079___    301 TGGCAAATTACAATTGTAGCCGGGGTGCTCTTATCTCCTTTGTTTTATGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    301 TGGCAAATTACAATTGTAGCCGGGGTGCTCTTATCTCCTTTGTTTTATGT    350

BSNT_02079___    351 CAAACAAGATATGCCGGGCGGTCCGCAGTTCGTTCGCCAAAAGATTCCCC    400
                     ||||||||||||||||||||||||||||.||.||||||||||||||||||
BSU12260___yj    351 CAAACAAGATATGCCGGGCGGTCCGCAGCTCATTCGCCAAAAGATTCCCC    400

BSNT_02079___    401 TGGTTTCACTTGGCACTTCCATGATCATCCTGATTGGAGCGGCTCTGATT    450
                     |||||||||||||||||||..|||||||||||||||||||||||||||||
BSU12260___yj    401 TGGTTTCACTTGGCACTTCTGTGATCATCCTGATTGGAGCGGCTCTGATT    450

BSNT_02079___    451 CAGCTTCAGCATGCAGAATCGCTTTCTGGGAGGATGCTGCTTTTCAGTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    451 CAGCTTCAGCATGCAGAATCGCTTTCTGGGAGGATGCTGCTTTTCAGTGT    500

BSNT_02079___    501 GCTGCCGGTTGTCATTGCGGCTTTTGCCTATCCGTTAGGAAACAGGAGAA    550
                     |||||||||||||||||||||||||||||||||||||||||||.|.||||
BSU12260___yj    501 GCTGCCGGTTGTCATTGCGGCTTTTGCCTATCCGTTAGGAAACCGAAGAA    550

BSNT_02079___    551 TGCTCGAAGAATACGGAGGCCGGCTTGATACATTTCAGCGCGTGCTTGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    551 TGCTCGAAGAATACGGAGGCCGGCTTGATACATTTCAGCGCGTGCTTGGA    600

BSNT_02079___    601 ATGACATTGGCAAGCCTTCCATTCTGGCTTATATTAGCAGCTTACGGCTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    601 ATGACATTGGCAAGCCTTCCATTCTGGCTTATATTAGCAGCTTACGGCTG    650

BSNT_02079___    651 GTGGTCAGACGGCCTTCCAACAGCAAGCCAAACCGTTCAATCCTTTATCG    700
                     |||||||||.|||||||||||||||||.||||||||||||||||||||||
BSU12260___yj    651 GTGGTCAGATGGCCTTCCAACAGCAAGTCAAACCGTTCAATCCTTTATCG    700

BSNT_02079___    701 TAGCCGTCAGCTCAGGCATCATTGCGACGGTTTTATTTTTCTGGGCCACT    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    701 TTGCCGTCAGCTCAGGCATCATTGCGACGGTTTTATTTTTCTGGGCCACT    750

BSNT_02079___    751 GATATGGTAAGAGACAATCCGCAAAAACTCGCAGCCGTTGAAGCCACTCA    800
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12260___yj    751 GATATGGTAAGAGACAATCCGCAAAAACTCGCAGCTGTTGAAGCCACTCA    800

BSNT_02079___    801 ATCCGGTGAAGTGATTTTCGCGTTGCTTGGTGAAATTGTTCTGCTGTCAG    850
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU12260___yj    801 ATCCGGTGAAGTGATTTTCGCGCTGCTTGGTGAAATTGTTCTGCTGTCAG    850

BSNT_02079___    851 GCGTTTTCCCATCTCTTTTATCATTTGCCGGTTTGTTCATTATAATAGCG    900
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU12260___yj    851 GCGTTTTCCCATCTCTATTATCATTTGCCGGTTTGTTCATTATAATAGCG    900

BSNT_02079___    901 GGGATGATGTTACATACCTTCGCTTCACAGCCGAGAAAACCGAAAAAGAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12260___yj    901 GGGATGATGTTACATACCTTCGCTTCACAGCCGAGAAAACCGAAAAAGAA    950

BSNT_02079___    951 AGCACAGTCAAATCTGACTGCTTAG    975
                     |||||||||||||||||||||.|||
BSU12260___yj    951 AGCACAGTCAAATCTGACTGCGTAG    975


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