Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02085 and BSU12290

See Amino acid alignment / Visit BSNT_02085 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence dna-align/BSNT_02085___yjlD.1.22522.seq
#    -bsequence dna-align/BSU12290___ndh.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02085___yjlD-BSU12290___ndh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02085___yjlD-BSU12290___ndh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02085___yjlD
# 2: BSU12290___ndh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity:    1162/1179 (98.6%)
# Similarity:  1162/1179 (98.6%)
# Gaps:           0/1179 ( 0.0%)
# Score: 5742.0
# 
#
#=======================================

BSNT_02085___      1 ATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGGAGTTCTTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd      1 ATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGGAGTTCTTTC     50

BSNT_02085___     51 TGCTCTAACAGTTCGCAAACATTACACAAAAGAACAAGCACGCGTGACAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd     51 TGCTCTAACAGTTCGCAAACATTACACAAAAGAACAAGCACGCGTGACAG    100

BSNT_02085___    101 TGGTAAACAAATACCCTACTCACCAAATCATTACGGAATTACACCGCCTT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU12290___nd    101 TGGTAAACAAATACCCAACTCACCAAATCATTACGGAATTACACCGCCTT    150

BSNT_02085___    151 GCTGCAGGCAACGTGTCTGAAAAAGCGGTTGCAATGCCATTAGAAAAACT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    151 GCTGCAGGCAACGTGTCTGAAAAAGCGGTTGCAATGCCATTAGAAAAACT    200

BSNT_02085___    201 TTTCAAAGGCAAAGACATTGATCTTAAAATTGCGGAAGTAAGTTCTTTCT    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12290___nd    201 TTTCAAAGGCAAAGACATTGATCTTAAAATTGCGGAAGTAAGCTCTTTCT    250

BSNT_02085___    251 CTGTTGATAAAAAAGAAGTTGCGCTTGCTGACGGTTCTACATTAACTTAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    251 CTGTTGATAAAAAAGAAGTTGCGCTTGCTGACGGTTCTACATTAACTTAC    300

BSNT_02085___    301 GATGCGCTTGTTGTAGGTCTTGGTTCGGTAACGGCTTACTTCGGCATCCC    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12290___nd    301 GATGCGCTTGTTGTAGGTCTTGGTTCTGTAACGGCTTACTTCGGCATCCC    350

BSNT_02085___    351 AGGTCTTGAAGAAAACAGCATGGTATTGAAATCTGCTGCTGATGCGAACA    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU12290___nd    351 AGGTCTTGAAGAAAACAGCATGGTATTGAAATCTGCTGCCGATGCGAACA    400

BSNT_02085___    401 AAGTCTTCCAGCATGTTGAAGATCGTGTGCGCGAGTACTCTAAAACGAAA    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU12290___nd    401 AAGTCTTCCAACATGTTGAAGATCGTGTGCGCGAGTACTCTAAAACGAAA    450

BSNT_02085___    451 AATGAAGCAGATGCAACAATCCTTATCGGCGGCGGCGGCTTAACAGGCGT    500
                     ||.|||||||||||||||||||||||||||||.||||||||||||||.||
BSU12290___nd    451 AACGAAGCAGATGCAACAATCCTTATCGGCGGAGGCGGCTTAACAGGTGT    500

BSNT_02085___    501 TGAGCTTGTTGGTGAGCTTGCTGACATCATGCCGAACCTTGCGAAAAAAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    501 TGAGCTTGTTGGTGAGCTTGCTGACATCATGCCGAACCTTGCGAAAAAAT    550

BSNT_02085___    551 ACGGCGTAGACCATAAAGAAATCAAATTGAAACTTGTTGAAGCAGGTCCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    551 ACGGCGTAGACCATAAAGAAATCAAATTGAAACTTGTTGAAGCAGGTCCG    600

BSNT_02085___    601 AAAATCCTTCCTGTTCTTCCGGATGATCTTATCGAACGTGCGACTGCAAG    650
                     ||.||||||||||||||||||||||||||||||||.||||||||||||||
BSU12290___nd    601 AAGATCCTTCCTGTTCTTCCGGATGATCTTATCGAGCGTGCGACTGCAAG    650

BSNT_02085___    651 CCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    651 CCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG    700

BSNT_02085___    701 TAGAAGGAAACGTAATTGATCTGAAAGACGGATCTAAAGTTGTTGCCAAC    750
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU12290___nd    701 TAGAAGGAAACGTAATCGATCTGAAAGACGGATCTAAAGTTGTTGCCAAC    750

BSNT_02085___    751 ACATTTGTTTGGACTGGCGGCGTACAAGGTAACCCATTAGTCGGTGAATC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    751 ACATTTGTTTGGACTGGCGGCGTACAAGGTAACCCATTAGTCGGTGAATC    800

BSNT_02085___    801 AGGCCTAGAAGTGAACCGCGGACGCGCGACTGTAAATGACTTCCTGCAAT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    801 AGGCCTAGAAGTGAACCGCGGACGCGCGACTGTAAATGACTTCCTGCAAT    850

BSNT_02085___    851 CTACATCTCATGAAGATGTATTCGTTGCTGGAGACAGCGCAGTTTACTTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    851 CTACATCTCATGAAGATGTATTCGTTGCTGGAGACAGCGCAGTTTACTTC    900

BSNT_02085___    901 GGTCCAGACGGCCGTCCATACCCGCCAACTGCACAAATCGCATGGCAAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd    901 GGTCCAGACGGCCGTCCATACCCGCCAACTGCACAAATCGCATGGCAAAT    950

BSNT_02085___    951 GGGTGAGCTGATCGGTTACAACCTATTTGCTTACCTGGAAGGCAAAACGC   1000
                     |||||||||||||||||||||||||||.||||||||.|||||||||||||
BSU12290___nd    951 GGGTGAGCTGATCGGTTACAACCTATTCGCTTACCTAGAAGGCAAAACGC   1000

BSNT_02085___   1001 TTGAAACATTCAAGCCAGTAAACTCTGGTACACTTGCAAGCCTTGGACGC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd   1001 TTGAAACATTCAAGCCAGTAAACTCTGGTACACTTGCAAGCCTTGGACGC   1050

BSNT_02085___   1051 AAAGACGCGGTTGCCATCATTGGTGCTAATTCTACACCGCTTAAAGGTCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12290___nd   1051 AAAGACGCGGTTGCCATCATTGGTGCTAATTCTACACCGCTTAAAGGTCT   1100

BSNT_02085___   1101 TCCTGCTTCCTTGATGAAAGAAGCAAGTAACGTACGCTATTTAACACACA   1150
                     ||||||||||||||||||||||||||||||.|||||.|||||.|||||.|
BSU12290___nd   1101 TCCTGCTTCCTTGATGAAAGAAGCAAGTAATGTACGATATTTGACACATA   1150

BSNT_02085___   1151 TTAAAGGACTTTTCAGCCTGGCTTACTAA   1179
                     |||||||||||||||||||||||||||||
BSU12290___nd   1151 TTAAAGGACTTTTCAGCCTGGCTTACTAA   1179


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