Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02090 and BSU12320

See Amino acid alignment / Visit BSNT_02090 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:29
# Commandline: needle
#    -asequence dna-align/BSNT_02090___yjmC.1.22522.seq
#    -bsequence dna-align/BSU12320___yjmC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02090___yjmC-BSU12320___yjmC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02090___yjmC-BSU12320___yjmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02090___yjmC
# 2: BSU12320___yjmC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity:     993/1014 (97.9%)
# Similarity:   993/1014 (97.9%)
# Gaps:           0/1014 ( 0.0%)
# Score: 4881.0
# 
#
#=======================================

BSNT_02090___      1 TTGAAAACGATAACAATTGCAGCTGAAGAAGCAAAGGAACTCGTTCGGCA     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12320___yj      1 TTGAAAACGATAACAATTGCAGCTGAAGAAGCAAAGGAACTCGTTTGGCA     50

BSNT_02090___     51 AAAGCTGGCCGGTGCCGGTTTGAATGAACGAGATGCTGAAAAAGTAGCAG    100
                     ||||||||.||||||||||||||||||||||||||||||||||||.||||
BSU12320___yj     51 AAAGCTGGACGGTGCCGGTTTGAATGAACGAGATGCTGAAAAAGTGGCAG    100

BSNT_02090___    101 ATGTTCTCGTGCACGCTGATTTGCGCAATGTACATTCGCATGGCGTGCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    101 ATGTTCTCGTGCACGCTGATTTGCGCAATGTACATTCGCATGGCGTGCTG    150

BSNT_02090___    151 CGCACAGAACACTATGTGAACAGGCTTTTAGCGGGAGGGATCAATCCTGG    200
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    151 CACACAGAACACTATGTGAACAGGCTTTTAGCGGGAGGGATCAATCCTGG    200

BSNT_02090___    201 GGCACAGCCTGTTTTTAAAGAAACGGGACCTGTGACCGGGGTGCTTGACG    250
                     |||||||||||||||||||||.|||||.||||||||||||||||||||||
BSU12320___yj    201 GGCACAGCCTGTTTTTAAAGAGACGGGGCCTGTGACCGGGGTGCTTGACG    250

BSNT_02090___    251 GAGACGATGGTTTCGGTAATGTGAATTGCGACATGGCGATGGACCATGCA    300
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU12320___yj    251 GAGACGATGGTTTCGGTCATGTGAATTGCGACATGGCGATGGACCATGCA    300

BSNT_02090___    301 ATTGACATGGCGAAGAAAAAAGGAGTCGGCATGGTTACGGCCGTAAACAG    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12320___yj    301 ATTGACATGGCGAAGAAAAAAGGAGTCGGCATGGTCACGGCCGTAAACAG    350

BSNT_02090___    351 CAGCCATTGCGGAGCGCTAAGCTATTTTGTGCAAAAAGCCGCTGACGAAA    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU12320___yj    351 CAGCCATTGCGGAGCGCTAAGCTATTTTGTGCAAAAAGCGGCTGACGAAA    400

BSNT_02090___    401 AGCTAATCGGAATGGCAATGACGCATACAGACAGTATCGTTGTCCCGTTT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||.|||
BSU12320___yj    401 AGCTGATCGGAATGGCAATGACGCATACAGACAGTATCGTTGTCCCATTT    450

BSNT_02090___    451 GGGGGGAGGACTCCTTTTTTAGGGACAAATCCGATTGCTTACGGTGTTCC    500
                     |||||||||||||||.||||||||||||||||||||||||||||.|||||
BSU12320___yj    451 GGGGGGAGGACTCCTATTTTAGGGACAAATCCGATTGCTTACGGAGTTCC    500

BSNT_02090___    501 GGCTAAGCATAAAAAACCGTTTATCCTAGATATGGCGACATCCAAAGTGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    501 GGCTAAGCATAAAAAACCGTTTATCCTAGATATGGCGACATCCAAAGTGG    550

BSNT_02090___    551 CTTTTGGGAAGATTCTGCAGGCCCGTGAAGAGGGCAAAGAAATTCCTGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    551 CTTTTGGGAAGATTCTGCAGGCCCGTGAAGAGGGCAAAGAAATTCCTGAA    600

BSNT_02090___    601 GGATGGGGAGTCGATGAAAACGGAGAAGCAGTAACTGATCCTGACAAGAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12320___yj    601 GGATGGGGAGTCGATGAAAACGGAGAAGCAGTAACTGATCCTGACAAGGT    650

BSNT_02090___    651 CGTCTCACTTTCAACATTCGGCGGCCCGAAAGGCTATGGACTATCGATTG    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU12320___yj    651 CGTCTCACTTTCAACATTCGGGGGCCCGAAAGGCTATGGACTATCGATTG    700

BSNT_02090___    701 TGGTGGATGTGTTTTCCGGATTGCTGGCGGGCGCGGCTTTTGGCCCTCAT    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    701 TAGTGGATGTGTTTTCCGGATTGCTGGCGGGCGCGGCTTTTGGCCCTCAT    750

BSNT_02090___    751 ATTGCCAAAATGTACAGCGGCCTTGATCAAAAAAGAAAGCTGGGACATTA    800
                     ||||||||||||||||.|||||||||||||||||||||||||||.|||||
BSU12320___yj    751 ATTGCCAAAATGTACAACGGCCTTGATCAAAAAAGAAAGCTGGGGCATTA    800

BSNT_02090___    801 CGTTTGTGCGATCAATCCAGCCTTTTTTACTGACTGGGATACGTTTTTAG    850
                     ||||||.||||||||||||.||||||||||||||||||||||||||||||
BSU12320___yj    801 CGTTTGCGCGATCAATCCATCCTTTTTTACTGACTGGGATACGTTTTTAG    850

BSNT_02090___    851 AGCAGATGGATGCCATGATTGATGAACTGCAGCAATCACCGCCGGCTGTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    851 AGCAGATGGATGCCATGATTGATGAACTGCAGCAATCACCGCCGGCTGTT    900

BSNT_02090___    901 GGATTCGAAAGAGTGTATGTGCCCGGCGAGATCGAGCAGCTGCATGAAGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12320___yj    901 GGATTCGAAAGAGTGTATGTGCCCGGCGAGATCGAGCAGCTGCATGAAGA    950

BSNT_02090___    951 AAGAAATAAGAAAAACGGAATTTCCATCGCCCGGAGCGTGTATGAATTCT   1000
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12320___yj    951 AAGAAATAAGAAAAACGGAATTTCTATCGCCCGGAGCGTGTATGAATTCT   1000

BSNT_02090___   1001 TAAAAAGCAGGTGA   1014
                     ||||||||||||||
BSU12320___yj   1001 TAAAAAGCAGGTGA   1014


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