Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02099 and BSU12390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:31
# Commandline: needle
# -asequence dna-align/BSNT_02099___uxaA.1.22522.seq
# -bsequence dna-align/BSU12390___uxaA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02099___uxaA-BSU12390___uxaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02099___uxaA-BSU12390___uxaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02099___uxaA
# 2: BSU12390___uxaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1494
# Identity: 1465/1494 (98.1%)
# Similarity: 1465/1494 (98.1%)
# Gaps: 0/1494 ( 0.0%)
# Score: 7209.0
#
#
#=======================================
BSNT_02099___ 1 TTGAAGTCGTTTATAAAGATTCATAAGCAAGATAATATCCTTCTTGCTCT 50
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12390___ux 1 TTGAAGTCGTTTATAAAGATTCATAAGCAAGATAATGTCCTTCTTGCTCT 50
BSNT_02099___ 51 GCGGGATATCCAAAAGGGAGAGAGGCTGCATGCGGACGGCGTGTCGATTG 100
|||||||||.|||||||||||||||||||||||..|||||||||||||||
BSU12390___ux 51 GCGGGATATTCAAAAGGGAGAGAGGCTGCATGCTTACGGCGTGTCGATTG 100
BSNT_02099___ 101 AAGTAAAGAATGATATAAAAAGAGGCCATAAGATTGCATTGCAGTCTATC 150
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 101 AAGTAAAGGATGATATAAAAAGAGGCCATAAGATTGCATTGCAGTCTATC 150
BSNT_02099___ 151 AAAGAAAACGACAGCATCATCAAGTACGGGTTTCCAATCGGTCATGCATC 200
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12390___ux 151 AAAGAAAACGACAGCATCGTCAAGTACGGGTTTCCAATCGGTCATGCATC 200
BSNT_02099___ 201 ACAAGATATCTCGATCGGAGAGCATATTCATGTCCATAATACGAAAACAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 201 ACAAGATATCTCGATCGGAGAGCATATTCATGTCCATAATACGAAAACAA 250
BSNT_02099___ 251 ACCTGTCTGATATCCAATCATACAGCTATACACCGAGATTTGATGAAAAT 300
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12390___ux 251 ACCTGTCTGATATCCAATTATACAGCTATACACCGAGATTTGATGAAAAT 300
BSNT_02099___ 301 CCGTATTCTAATGAGAACCGGACGTTTAAAGGTTTTAGAAGAGAAAACGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 301 CCGTATTCTAATGAGAACCGGACGTTTAAAGGTTTTAGAAGAGAAAACGG 350
BSNT_02099___ 351 AGATGCGGGTGTACGGAATGAATTGTGGATTGTCCCAACTGTCGGCTGTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 351 AGATGCGGGTGTACGGAATGAATTGTGGATTGTCCCAACTGTCGGCTGTG 400
BSNT_02099___ 401 TCAATGGAATAGCAGAAAAAATGCTGCAGCGTTTTGTCAGAGAAACAGGG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 401 TCAATGGAATAGCAGAAAAAATGCTGCAGCGTTTTGTCAGAGAAACAGGG 450
BSNT_02099___ 451 GATATCGCTCCATTTGATAACGTACTGGTGTTAAAGCATCAATACGGATG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 451 GATATCGCTCCATTTGATAACGTACTGGTGTTAAAGCATCAATACGGATG 500
BSNT_02099___ 501 CTCGCAGCTTGGCGATGATCACGAAAATACGAAGCAAATCCTGCTGAATG 550
|||||||||||||||.|||||.||||||||||||||.|||||||||||||
BSU12390___ux 501 CTCGCAGCTTGGCGACGATCATGAAAATACGAAGCAGATCCTGCTGAATG 550
BSNT_02099___ 551 CCATTCGCCATCCAAATGCCGGCGGCGTCTTGGTGTTAGGGCTTGGCTGT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 551 CCATTCGCCATCCAAATGCCGGCGGCGTCTTGGTGTTAGGGCTTGGCTGT 600
BSNT_02099___ 601 GAAAACAATGAGCTGGCAAGAATGAAGGAAGCACTGCAAGATGTGAACCT 650
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12390___ux 601 GAAAACAATGAGCTGGCAAGAATGAAGGAAGCACTGCAAGATGTGAACTT 650
BSNT_02099___ 651 GGAGCGGGTGAAGTTTCTGGAATCCCAGTCGGTGACCGACGAAATGGAGG 700
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 651 GAAGCGGGTGAAGTTTCTGGAATCCCAGTCGGTGACCGACGAAATGGAGG 700
BSNT_02099___ 701 CAGGTGTTGCTTTGCTGAAGGAAATTCATGAAGCGGCCAAAGGAGATAAG 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 701 CAGGCGTTGCTTTGCTGAAGGAAATTCATGAAGCGGCCAAAGGAGATAAG 750
BSNT_02099___ 751 AGAGAAGACATTCCGCTGTCTGAACTGAAGATCGGGCTGAAATGCGGAGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 751 AGAGAAGACATTCCGCTGTCTGAACTGAAGATCGGGCTGAAATGCGGAGG 800
BSNT_02099___ 801 TTCGGACGGTTTTTCCGGCATAACCGCAAACCCGCTGCTTGGACGTTTTT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 801 TTCGGACGGTTTTTCCGGCATAACCGCAAACCCGCTGCTTGGACGTTTTT 850
BSNT_02099___ 851 CAGATTATCTCATTGCACAGGGAGGGAGCACGGTGCTGACGGAAGTACCG 900
||||||||||||||||||||||||||||.||.||||||||||||||||||
BSU12390___ux 851 CAGATTATCTCATTGCACAGGGAGGGAGTACTGTGCTGACGGAAGTACCG 900
BSNT_02099___ 901 GAAATGTTCGGCGCAGAAACCATCCTGATGCAGCGGGCTGCCAATGAAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 901 GAAATGTTCGGCGCAGAAACCATCCTGATGCAGCGGGCTGCCAATGAAGA 950
BSNT_02099___ 951 AGTGTTTCATAAGATAGTCGATTTAATCAATGATTTCAAACAATACTTTA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 951 AGTGTTTCATAAGATAGTCGATTTAATCAATGATTTCAAACAATACTTTA 1000
BSNT_02099___ 1001 TTAAACATGATCAGCCGGTGTACGAAAATCCCTCACCGGGCAACAAAGCG 1050
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU12390___ux 1001 TTAAACATGATCAGCCGGTGTACGAAAATCCTTCACCGGGCAACAAAGCG 1050
BSNT_02099___ 1051 GGCGGCATTTCTACACTTGAGGATAAATCGCTGGGCTGTACGCAAAAAGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 1051 GGCGGCATTTCTACACTTGAGGATAAATCGCTGGGCTGTACGCAAAAAGC 1100
BSNT_02099___ 1101 GGGGATTTCTCCTGTCACGGATGTCTTGAAATACGGGGAAGTGCTCAAGA 1150
||||||||||||||||||||||||||||||||||||.|||||.|||||||
BSU12390___ux 1101 GGGGATTTCTCCTGTCACGGATGTCTTGAAATACGGTGAAGTACTCAAGA 1150
BSNT_02099___ 1151 CAAGAGGGCTGACGCTTTTGAGCGCGCCAGGCAATGATTTGATCGCCTCC 1200
|||.|||||||||.|||||||||||.||.|||||||||||||||||||||
BSU12390___ux 1151 CAAAAGGGCTGACTCTTTTGAGCGCACCGGGCAATGATTTGATCGCCTCC 1200
BSNT_02099___ 1201 TCCGCATTGGCGGCGGCCGGCTGCCAAATTGTCCTCTTTACAACGGGGAG 1250
||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU12390___ux 1201 TCCGCATTGGCGGCTGCCGGCTGCCAAATTGTCCTCTTTACAACGGGAAG 1250
BSNT_02099___ 1251 AGGCACGCCGTTTGGCAGCTTTGTCCCGACGGTGAAAGTAGCGACAAACA 1300
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU12390___ux 1251 AGGCACGCCGTTTGGCACCTTTGTCCCGACGGTGAAAGTAGCGACAAACA 1300
BSNT_02099___ 1301 CCGAGCTGTATGAAGCGAAGCCGCATTGGATTGATTTTAACGCAGGCCTT 1350
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12390___ux 1301 CCGAGCTGTATGAGGCGAAGCCGCATTGGATTGATTTTAACGCAGGCCTT 1350
BSNT_02099___ 1351 TTAGCAGAGGATGATGTTCATGAGGAATATGTGCTGCGTGAGTTTATCCA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 1351 TTAGCAGAGGATGATGTTCATGAGGAATATGTGCTGCGTGAGTTTATCCA 1400
BSNT_02099___ 1401 CTATATGGTTGAGGTGGCAAGCGGCCAGCTTGTGAACCATGAAAAAAATG 1450
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU12390___ux 1401 CTATATGATTGAGGTGGCAAGCGGCCAGCTTGTGAACCATGAAAAAAATG 1450
BSNT_02099___ 1451 ATTTCAGAGAACTCGCCATTTTTAAATCGGGTGTGACGCTATAA 1494
||||||.|||||||||||||||||||||||||||||||.|||||
BSU12390___ux 1451 ATTTCAAAGAACTCGCCATTTTTAAATCGGGTGTGACGTTATAA 1494
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