Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02123 and BSU12540

See Amino acid alignment / Visit BSNT_02123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:33
# Commandline: needle
#    -asequence dna-align/BSNT_02123___xkdD.1.22522.seq
#    -bsequence dna-align/BSU12540___xkdD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02123___xkdD-BSU12540___xkdD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02123___xkdD-BSU12540___xkdD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02123___xkdD
# 2: BSU12540___xkdD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     338/351 (96.3%)
# Similarity:   338/351 (96.3%)
# Gaps:           0/351 ( 0.0%)
# Score: 1638.0
# 
#
#=======================================

BSNT_02123___      1 GTGAAAGTGTTGGCAAAGACAAAACAGGCAGAGAAAAGCCCTGCGCCGTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12540___xk      1 GTGAAAGTGTTGGCAAAGACAAAACAGGCAGAGAAAAGCCCTGCGCCGTG     50

BSNT_02123___     51 GCGTGCTGTCCCATGCGGGGATACGAAACCGATCTATATTTATTCAGCTT    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU12540___xk     51 GCGTGCTGTCCCGTGCGGGGATACGAAACCGATCTATATTTATTCAGCTT    100

BSNT_02123___    101 ACAGTGAAGAAGAAAAAGAAAGATTCCCATATTCAAACGGACGGCTGATT    150
                     |||||||||||||||||||||||||.||.||.||||||||.|||||||||
BSU12540___xk    101 ACAGTGAAGAAGAAAAAGAAAGATTTCCGTACTCAAACGGGCGGCTGATT    150

BSNT_02123___    151 GCCGCTGTATTTGACCTTAGCTCTTATTCGCAAAAAAGCAATGCCGCTTT    200
                     ||.||||||||||||||.|||||||||||||||||||||||||||.||||
BSU12540___xk    151 GCAGCTGTATTTGACCTCAGCTCTTATTCGCAAAAAAGCAATGCCTCTTT    200

BSNT_02123___    201 GATGGCCGCTGCGCCTGAATTGCTGGAAGCGTCTAAAGCAGCACTTGATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12540___xk    201 GATGGCCGCTGCGCCTGAATTGCTGGAAGCGTCTAAAGCAGCACTTGATT    250

BSNT_02123___    251 TTCTGAAAGGGAATTCTGTTCATTCAAAGGAGCGCATCATTCTGCTATTA    300
                     |||||||||||||||||.||||||||||||||||.|||||||.|||||||
BSU12540___xk    251 TTCTGAAAGGGAATTCTATTCATTCAAAGGAGCGTATCATTCAGCTATTA    300

BSNT_02123___    301 GAAAAAGCTGAAGCAAGCGCTGCACCGAAAAGGGGAGGAAAAGAAACATG    350
                     |||||||||||||||||||||||||||||||||||||||||..|||||||
BSU12540___xk    301 GAAAAAGCTGAAGCAAGCGCTGCACCGAAAAGGGGAGGAAATAAAACATG    350

BSNT_02123___    351 A    351
                     |
BSU12540___xk    351 A    351


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