Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02146 and BSU12660

See Amino acid alignment / Visit BSNT_02146 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:35
# Commandline: needle
#    -asequence dna-align/BSNT_02146___xkdM.1.22522.seq
#    -bsequence dna-align/BSU12660___xkdM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02146___xkdM-BSU12660___xkdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02146___xkdM-BSU12660___xkdM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02146___xkdM
# 2: BSU12660___xkdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     435/444 (98.0%)
# Similarity:   435/444 (98.0%)
# Gaps:           0/444 ( 0.0%)
# Score: 2139.0
# 
#
#=======================================

BSNT_02146___      1 ATGGCATTAAAAGCACAAAACACAATTTCAGGAAAAGAAGGCCGTTTATT     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12660___xk      1 ATGGCATTAAAAGCACAAAACACAATCTCAGGAAAAGAAGGCCGTTTATT     50

BSNT_02146___     51 CCTCGATGGCGAGGAAATGGCGCACATCAAAACATTTGAAGCAAACGTTG    100
                     |||||||||.|||||||||||.|||||||||||.||||||||||||||.|
BSU12660___xk     51 CCTCGATGGTGAGGAAATGGCACACATCAAAACTTTTGAAGCAAACGTCG    100

BSNT_02146___    101 AGAAAAACAAATCTGAAGTCAACATTATGGGCCGCCGCATGACAGGCCAT    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU12660___xk    101 AGAAAAACAAGTCTGAAGTCAACATTATGGGCCGCCGCATGACAGGCCAT    150

BSNT_02146___    151 AAAACAACAGGGGCAAATGGAACAGGGACCGCAACGTTCTACAAAGTCAC    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12660___xk    151 AAAACAACAGGGGCAAATGGAACAGGGACCGCGACGTTCTACAAAGTCAC    200

BSNT_02146___    201 ATCAAAATTCGTGCTATTGATGATGGACTATGTCAAAAAAGGCAGCGACC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12660___xk    201 ATCAAAATTCGTGCTATTGATGATGGACTATGTCAAAAAAGGCAGCGACC    250

BSNT_02146___    251 CTTATTTCACGCTCCAAGCCGTGCTGGATGATCAATCCTCCGGCCGGGGC    300
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU12660___xk    251 CTTATTTCACGCTCCAAGCTGTGCTGGATGATCAATCCTCCGGCCGGGGC    300

BSNT_02146___    301 ACAGAGCGAGTCACGCTGTACGACGTCAACTTTGACTCTGCCAAAATCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12660___xk    301 ACAGAGCGAGTCACGCTGTACGACGTCAACTTTGACTCTGCCAAAATCGC    350

BSNT_02146___    351 AAGCCTTGATGTCAATTCAGAAGCGTTAGAGGAAGAAGTTCCATTTACAT    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12660___xk    351 AAGCCTTGATGTCGATTCAGAAGCGTTAGAGGAAGAAGTTCCATTTACAT    400

BSNT_02146___    401 TCGAAGACTTCGACGTCCCTGAAAAGCTATCTGACACGTTTTAA    444
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU12660___xk    401 TCGAAGACTTCGACGTCCCTGAAAAGCTATCTGACACGTTTTAA    444


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