Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02160 and BSU12750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:39
# Commandline: needle
# -asequence dna-align/BSNT_02160___xkdV.1.22522.seq
# -bsequence dna-align/BSU12750___xkdV.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02160___xkdV-BSU12750___xkdV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02160___xkdV-BSU12750___xkdV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02160___xkdV
# 2: BSU12750___xkdV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2119
# Identity: 1778/2119 (83.9%)
# Similarity: 1778/2119 (83.9%)
# Gaps: 110/2119 ( 5.2%)
# Score: 7597.5
#
#
#=======================================
BSNT_02160___ 1 ATGGCATACGAAGAAAAAACAGACTGGCTTCCGGACGACCCAATCAACGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 1 ATGGCATACGAAGAAAAAACAGACTGGCTTCCGGACGACCCAATCAACGA 50
BSNT_02160___ 51 AGATGACGTCAACCGCTGGGAAAAAGGCATAAAAGACGCCCACACCGACC 100
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU12750___xk 51 AGATGACGTCAACCGCTGGGAAAAAGGAATAAAAGACGCCCACACCGACC 100
BSNT_02160___ 101 TGGCCGCCCACAAAAACGACATGAACAACCCCCACAACACAACAAAGGCG 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 101 TGGCTGCCCACAAAAACGACATGAACAACCCCCACAACACAACAAAGGCG 150
BSNT_02160___ 151 CAAATCGGGCTGGGGAACGTGGATAATGTGCAGCAGGCGGCGAAGAAGGA 200
|||||||||||||||||.||||||||||||||||||||..|.||||.|||
BSU12750___xk 151 CAAATCGGGCTGGGGAATGTGGATAATGTGCAGCAGGCTTCAAAGACGGA 200
BSNT_02160___ 201 TTTTGACAAGCATGAGCAAGAT-----CAGGTGCGGCATATTACATCGAC 245
.|||.|..|.|||.|.||.||| | ||||||||||||||...
BSU12750___xk 201 ATTTAATGAACATAATCATGATTCAACC-----CGGCATATTACATCAGT 245
BSNT_02160___ 246 AGAGCGTGAAAACTGGAACGCAAAAGAAACTCCAGGTGAAGCTCAAAATA 295
|||.|||||..|.|||||.||.||.|||||.||.|..|.|||.||..|||
BSU12750___xk 246 AGAACGTGATGAATGGAATGCGAAGGAAACACCTGCCGGAGCCCAGTATA 295
BSNT_02160___ 296 AGGCAGATCAAGCTGAAGCAAACGCCAAAGCCTATACAGATAGTTTTGCT 345
|||||||||||||||||||||||||||||||.||||||||.|.|||||||
BSU12750___xk 296 AGGCAGATCAAGCTGAAGCAAACGCCAAAGCATATACAGACAATTTTGCT 345
BSNT_02160___ 346 GCACGAAGAGATAATCCTAACCAAGTAACAAAAGCACAAGTTGGACTTGG 395
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU12750___xk 346 GCACGAAGAGATAATCCTAACCAAGTAACAAAAGCACAGGTTGGACTTGG 395
BSNT_02160___ 396 GAATGTCGAAAATGTGAAACAAGCCTCACAAGCAGATTTTGATGCTCATT 445
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU12750___xk 396 GAATGTCGAAAATGTGAAACAAGCCTCACTAGCAGATTTTGATGCTCATT 445
BSNT_02160___ 446 TAAGCAATACTAAAGTTCATGTATCTGAAGGGGAAAGAAATAAATGGAAT 495
||||||||.|||||||||||||||||||||||||||||||.|||||||||
BSU12750___xk 446 TAAGCAATTCTAAAGTTCATGTATCTGAAGGGGAAAGAAACAAATGGAAT 495
BSNT_02160___ 496 GCTGCCCAACTAATTAAACTTACTGGAGACGATGGTAAAAGAATACAACT 545
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12750___xk 496 GCTGCCCAACTAATTAAACTTACTGGAGACGACGGTAAAAGAATACAACT 545
BSNT_02160___ 546 CCAAGACGGTACAGATATTCTTACATTATCTTCTGGGTTTTATTGTGCAG 595
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12750___xk 546 CCAAGACGGTACAGATATTCTTACATTATCTTCTGGATTTTATTGTGCAG 595
BSNT_02160___ 596 TTGGTCAGTCAGTTGTAAACAACCCGGTGGAAGGCGATGCAACTTGGTAT 645
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12750___xk 596 TTGGTCAGTCAGTTGTAAACAACCCGGTGGAAGGCGATGCAGCTTGGTAT 645
BSNT_02160___ 646 AACTACGATATTGTAGAAGGCGGTTCAGGAAGGAAAACAATAGTAGCTTA 695
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 646 AACTACGATATTGTAGAAGGCGGTTCAGGAAGGAAAACAATAGTAGCTTA 695
BSNT_02160___ 696 CCAAAGTTGGGGAAGCATGATGTGGATCGGAATGGTTCACACTGATGGAG 745
|||||||||||||||.|||||||||||.||||||||||||||||||||||
BSU12750___xk 696 CCAAAGTTGGGGAAGTATGATGTGGATTGGAATGGTTCACACTGATGGAG 745
BSNT_02160___ 746 AATTTAGAGGATGGAAACAAATTGCAACAACAGATTTTATAGATAGAGTT 795
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 746 AATTTAGAGGATGGAAACAAATTGCAACAACAGATTTTATAGATAGAGTT 795
BSNT_02160___ 796 CAATCAGAATTAGATATTCATAAAAATGATAAAACTAATCCACATTCAGT 845
|||.|||||||||||.|||||.|||||||||||||||||||.||||||||
BSU12750___xk 796 CAAACAGAATTAGATCTTCATGAAAATGATAAAACTAATCCTCATTCAGT 845
BSNT_02160___ 846 TACTAAACAACAAGTGGGTCTCGGAAATGTTGAGAATGTTAAGCAGGAGA 895
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 846 TACTAAACAACAAGTGGGTCTCGGAAATGTTGAGAATGTTAAGCAGGAGA 895
BSNT_02160___ 896 CACCTGATGGTGCGCAAAAAAAAGCTGATACTGCTTTGAACCAATCAAAA 945
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12750___xk 896 CACCTGATGGTGCGCAAAAAAAAGCTGATACTGCTTTAAACCAATCAAAA 945
BSNT_02160___ 946 GATTATACTAACAGCACGGCCTTTATTACTAGACCATTAAATTCAATAAC 995
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 946 GATTATACTAACAGCACGGCCTTTATTACTAGACCATTAAATTCAATAAC 995
BSNT_02160___ 996 CGATGCAAATGATTTAAATCTTCCGCCTGGCACTTATCGTTTAGACACTA 1045
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 996 CGATGCAAATGATTTAAATCTTCCGCCTGGCACTTATCGTTTAGACACTA 1045
BSNT_02160___ 1046 ATTACATGAATGCAAATCCAGAATTGCAAAATCAATTTCCGCTAAATGAT 1095
|||||||||||||||||||||..|||||||||||||||||..||||||||
BSU12750___xk 1046 ATTACATGAATGCAAATCCAGTTTTGCAAAATCAATTTCCATTAAATGAT 1095
BSNT_02160___ 1096 AACAGAACAGGTTTATTAATTATCTACCCTTCTGCAAATAAATGGGCTAC 1145
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU12750___xk 1096 AACAGAACAGGTTTATTAATTATCTACCCCTCTGCAAATAAATGGGCTAC 1145
BSNT_02160___ 1146 ACGTCAAGATTGGTTTAGCATCTCTACGAAAACACTTTATACAAGGGTAG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12750___xk 1146 ACGTCAAGATTGGTTTAGCATCTCTACGAAAACACTTTATACAAGGGTAG 1195
BSNT_02160___ 1196 CTGTTAATGGTACTGAGTATACCGATTGGTATATATTGGAAACATCGGAA 1245
|.||||||||||||||.|||.|.|..|||||||||||.||.|..||||||
BSU12750___xk 1196 CAGTTAATGGTACTGATTATTCAGGGTGGTATATATTAGAGAATTCGGAA 1245
BSNT_02160___ 1246 GGTTCACAAAGTAAAGCAGATAAAGCTTTAGCTGATGCTAAAAACTATGT 1295
||||||||||.||||||.||||||||||||||||||||||||||||||||
BSU12750___xk 1246 GGTTCACAAAATAAAGCGGATAAAGCTTTAGCTGATGCTAAAAACTATGT 1295
BSNT_02160___ 1296 TGACTCTAACTATACGAATAATAAATTAACAGTTCTTACAGGATCCAATG 1345
|||..|.||.|||||.|||.|.||.|||||.|||||.||||||||.||||
BSU12750___xk 1296 TGAAACAAATTATACAAATCAAAAGTTAACTGTTCTAACAGGATCAAATG 1345
BSNT_02160___ 1346 CAATTCAAGACGCTAGAACAAGCGGCAATGAGTATCCAGCT--GGGCTGA 1393
||||.|||||.||.||||.||||||.|||||.|| ||..| ||..|.|
BSU12750___xk 1346 CAATCCAAGATGCGAGAATAAGCGGAAATGATTA--CAAATACGGAATCA 1393
BSNT_02160___ 1394 CTTTTATGGATATAGGAGCAAATAATACAACAGGTTACCCGCTTACCTAT 1443
||||||||||.|||||.||.|||||.||.|||||.||||||||.||.|||
BSU12750___xk 1394 CTTTTATGGACATAGGGGCCAATAACACTACAGGATACCCGCTCACTTAT 1443
BSNT_02160___ 1444 GGCATAGTAAAAAATGAAAAGTATAGTAATTATCGATTTGCTCAATATTT 1493
||..|.|||||||||||||||.|||||||||||||.|||.||||.|||||
BSU12750___xk 1444 GGATTTGTAAAAAATGAAAAGCATAGTAATTATCGCTTTACTCAGTATTT 1493
BSNT_02160___ 1494 TTATGGGACAGGAAATG-AGTCAAACTCTTATTTTACTAGTACAGGTT-- 1540
.||| ||||||| ||.||.| ||||||..|.|||
BSU12750___xk 1494 CTAT------GGAAATGCAGACACA----------ACTAGTGGAAGTTAT 1527
BSNT_02160___ 1541 -------------CTTGGATTCGCCATTGGTGGTCCGATTCCGGTTGGAC 1577
|||||||.||||||||||||.|.|||||.||.|||||
BSU12750___xk 1528 GATCATGTAGGGACTTGGATCCGCCATTGGTGGGCAGATTCAGGCTGGAC 1577
BSNT_02160___ 1578 AGCTTGGCATAAAATTTCTGGATTTGCTCATGCAAATATCGGAACTACAG 1627
.||.|||||.||.||.||.||.||||||||.||.|||||.||.|||||.|
BSU12750___xk 1578 TGCGTGGCAAAAGATATCAGGGTTTGCTCACGCTAATATTGGGACTACTG 1627
BSNT_02160___ 1628 GAAAGC----AGCAATTGATTAAAGGAGAACTTCAAAAAGTAAAATATAA 1673
| || |||..|| ||||||||||||..|.|.|||.|.||||||||
BSU12750___xk 1628 G---GCGTCAAGCCCTT-ATTAAAGGAGAAAATAACAAAATTAAATATAA 1673
BSNT_02160___ 1674 TAGAAAAATAAAAGATAGCCATAATACT-TTTGATACTAAAAACAATAGA 1722
..|.|..||||||||||||||||| |.| ||||||||.|||||||||||.
BSU12750___xk 1674 CCGTATTATAAAAGATAGCCATAA-ATTGTTTGATACAAAAAACAATAGG 1722
BSNT_02160___ 1723 TTTATTGTTCCGA---ATGATGGAATGTTTTTGGTGAACGCGGGATTGTA 1769
| ||||..|.| |||..||||||..|||.||.|..||..|.||.||
BSU12750___xk 1723 T---TTGTAGCCAGTCATGCAGGAATGCATTTAGTCAGTGCTAGTTTATA 1769
BSNT_02160___ 1770 TATAGAAAATTATCAAAGGTATGTAAACTATGAATTGGACATTTATTTAA 1819
||||||||||..|.|..|.||....||.|.||||||..|..|||||.|||
BSU12750___xk 1770 TATAGAAAATACTGAGCGATACTCCAATTTTGAATTATATGTTTATGTAA 1819
BSNT_02160___ 1820 ATGGTGTTAGATATAAAAATATTGCA-CACTATAGGGCAAA--------- 1859
|.||....|..||| |||.||.||.| ||.|.||| ||
BSU12750___xk 1820 ACGGCACAAAGTAT-AAATTAATGAATCAATTTAG----AATGCCTACCC 1864
BSNT_02160___ 1860 --TCCAGGAGACCAGTCGGATACTACCGA----AAT--AAATGTTGGACT 1901
|||| |.|.|||| ||||.| || ||| ||.|||| ||
BSU12750___xk 1865 CTTCCA--ATAACAGT--GATAAT---GAGTTTAATGCAACTGTT--AC- 1904
BSNT_02160___ 1902 TTATGGGGCTGCAACAGTTCCAGC-AAATCAAGGGGATTATATTGAAATT 1950
|||..|||..|||||||| || ..||..|||.||||||.||||||||
BSU12750___xk 1905 ---TGGATCTGTTACAGTTCC-GCTTGATGCAGGAGATTATGTTGAAATT 1950
BSNT_02160___ 1951 TACTTATATGTCGGATATAACGGTG--GTACTACTCGGTATACAACAGAA 1998
||..|.|||||.||.|||..|||.| ||| ||.||.|||...|||||
BSU12750___xk 1951 TATGTTTATGTTGGTTATTCCGGGGATGTA--ACACGATATGTTACAGA- 1997
BSNT_02160___ 1999 AGCTCG--GGGTGGTAT-AACTACTTTGATATTACAGAAATCGGCGGCAG 2045
.||| .||.|.|.| ||.||.||||||.||...||..|.|||||.||
BSU12750___xk 1998 --TTCGAATGGAGCTCTCAATTATTTTGATGTTCTGGAGCTTGGCGGAAG 2045
BSNT_02160___ 2046 AAATTACCCGAGAACTTAG 2064
|||||||||||||..||||
BSU12750___xk 2046 AAATTACCCGAGAGTTTAG 2064
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