Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02170 and BSU12830

See Amino acid alignment / Visit BSNT_02170 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:40
# Commandline: needle
#    -asequence dna-align/BSNT_02170___spoIISA.1.22522.seq
#    -bsequence dna-align/BSU12830___spoIISA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02170___spoIISA-BSU12830___spoIISA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02170___spoIISA-BSU12830___spoIISA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02170___spoIISA
# 2: BSU12830___spoIISA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity:     741/747 (99.2%)
# Similarity:   741/747 (99.2%)
# Gaps:           0/747 ( 0.0%)
# Score: 3681.0
# 
#
#=======================================

BSNT_02170___      1 ATGGTTTTATTCTTTCAGATCATGGTCTGGTGCATCGTGGCCGGACTGGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp      1 ATGGTTTTATTCTTTCAGATCATGGTCTGGTGCATCGTGGCCGGACTGGG     50

BSNT_02170___     51 GTTATACGTGTATGCCACGTGGCGTTTCGAAGCGAAGGTCAAAGAAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp     51 GTTATACGTGTATGCCACGTGGCGTTTCGAAGCGAAGGTCAAAGAAAAAA    100

BSNT_02170___    101 TGTCCGCCATCCGGAAAACTTGGTATTTGCTGTTTGTTCTGGGCGCTATG    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU12830___sp    101 TGTCCGCCATTCGGAAAACTTGGTATTTGCTGTTTGTTCTGGGCGCTATG    150

BSNT_02170___    151 GTATACTGGACATATGAGCCCACTTCCCTATTTACCCACTGGGAACGGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    151 GTATACTGGACATATGAGCCCACTTCCCTATTTACCCACTGGGAACGGTA    200

BSNT_02170___    201 TCTCATTGTCGCAGTCAGTTTTGCTTTGATTGATGCTTTTATCTTCTTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    201 TCTCATTGTCGCAGTCAGTTTTGCTTTGATTGATGCTTTTATCTTCTTAA    250

BSNT_02170___    251 GTGCATACGTCAAAAAACTGGCCGGCAGCGAGCTTGAAACAGACACAAGA    300
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    251 GTGCATATGTCAAAAAACTGGCCGGCAGCGAGCTTGAAACAGACACAAGA    300

BSNT_02170___    301 GAAATTCTTGAAGAAAACAACGAAATGCTCCACATGTACCTCAATCGGCT    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU12830___sp    301 GAAATTCTTGAAGAAAACAACGAAATGCTCCACATGTATCTCAATCGGCT    350

BSNT_02170___    351 GAAAACATACCAATACCTATTGAAAAACGAACCGATCCATGTTTATTATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    351 GAAAACATACCAATACCTATTGAAAAACGAACCGATCCATGTTTATTATG    400

BSNT_02170___    401 GAAGTATAGATGCTTATGCTGAAGGTATTGATAAACTGCTGAAAACCTAT    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU12830___sp    401 GAAGTATAGATGCTTATGCTGAAGGTATTGATAAGCTGCTGAAAACCTAT    450

BSNT_02170___    451 GCTGATAAAATGAACTTAACGGCCTCTCTTTGCCACTATTCGACACAGGC    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU12830___sp    451 GCTGATAAAATGAACTTAACGGCTTCTCTTTGCCACTATTCGACACAGGC    500

BSNT_02170___    501 TGATAAAGACCGGTTAACCGAGCATATGGATGATCCGGCAGATGTACAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    501 TGATAAAGACCGGTTAACCGAGCATATGGATGATCCGGCAGATGTACAAA    550

BSNT_02170___    551 CACGGCTCGATCGAAAGGATGTTTATTACGACCAATACGGAAAAGTGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    551 CACGGCTCGATCGAAAGGATGTTTATTACGACCAATACGGAAAAGTGGTT    600

BSNT_02170___    601 CTCATCCCCTTTACCATCGAGACACAGAACTATGTCATCAAGCTGACGTC    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    601 CTCATCCCTTTTACCATCGAGACACAGAACTATGTCATCAAGCTGACGTC    650

BSNT_02170___    651 TGACAGCATTGTCACGGAATTTGATTATTTGCTATTTACGTCATTAACGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    651 TGACAGCATTGTCACGGAATTTGATTATTTGCTATTTACGTCATTAACGA    700

BSNT_02170___    701 GCATATATGATTTGGTGCTGCCAATTGAGGAGGAAGGTGAAGGATAA    747
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU12830___sp    701 GCATATATGATTTGGTGCTGCCAATTGAGGAGGAAGGTGAAGGATAA    747


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