Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02177 and BSU12880

See Amino acid alignment / Visit BSNT_02177 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:41
# Commandline: needle
#    -asequence dna-align/BSNT_02177___ykcB.1.22522.seq
#    -bsequence dna-align/BSU12880___ykcB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02177___ykcB-BSU12880___ykcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02177___ykcB-BSU12880___ykcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02177___ykcB
# 2: BSU12880___ykcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2151
# Identity:    2085/2151 (96.9%)
# Similarity:  2085/2151 (96.9%)
# Gaps:           0/2151 ( 0.0%)
# Score: 10161.0
# 
#
#=======================================

BSNT_02177___      1 GTGGAAAAGAAAAAACGCGAGCTGGATATTTTCCTCATCCTCATTTTGCT     50
                     |||||||||||||||||||||||||||||..|||||.|||||||||||||
BSU12880___yk      1 GTGGAAAAGAAAAAACGCGAGCTGGATATCGTCCTCCTCCTCATTTTGCT     50

BSNT_02177___     51 CGCATCTGCATTCTTAAATATCTATAACATCTGGAATGATGATACGGTGA    100
                     ||||||||||||||||||||||||||||||.|||||.||.||.|||||||
BSU12880___yk     51 CGCATCTGCATTCTTAAATATCTATAACATTTGGAAGGACGACACGGTGA    100

BSNT_02177___    101 ATCCTTATTACACCGCTGCAGTCACAAGTATGATGCAAAGCTTTCATAAT    150
                     ||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU12880___yk    101 ATCCTTATTACACCGCGGCAGTTACAAGTATGATGCAAAGCTTTCATAAT    150

BSNT_02177___    151 TTTTTCTATGCCTCATTCGACGCGGCGGGGTTTATAACGGTTGATAAACC    200
                     ||.||.|||||.||.|||||.||.||.||.||||||||.||.||||||||
BSU12880___yk    151 TTCTTTTATGCTTCGTTCGATGCTGCCGGCTTTATAACAGTAGATAAACC    200

BSNT_02177___    201 GCCTATTACGTTTCAGATACAAACCATCAGCGCACTTATATTCGGTATGC    250
                     ||||.||||.|..||.||.|||||.|||||||||||.|||||||||||||
BSU12880___yk    201 GCCTGTTACATACCAAATCCAAACGATCAGCGCACTGATATTCGGTATGC    250

BSNT_02177___    251 ACGGCTGGAGCGTCATCCTGCCTCAGGCACTTGCTGGTGTAGGTTCTGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    251 ACGGCTGGAGCGTCATCCTGCCTCAGGCACTTGCTGGTGTAGGTTCTGTC    300

BSNT_02177___    301 CTTTTAATGTATCTGTTAATAAAACCGACATTCGGTAAGACAGCAGCAAG    350
                     |||.|.|||||..||.|.|||||.||||||||.||.||.||.||.||..|
BSU12880___yk    301 CTTCTTATGTACTTGCTGATAAAGCCGACATTTGGAAAAACGGCGGCGCG    350

BSNT_02177___    351 AATTGCCTCTTTCATCATGGCATGTACACCGATTGCTGTAGCTGTAGCAC    400
                     .||||||||.||..|.|||||||||||.|||||.||||||||||||||||
BSU12880___yk    351 TATTGCCTCATTTGTTATGGCATGTACGCCGATAGCTGTAGCTGTAGCAC    400

BSNT_02177___    401 GTACAAACAATGTTGATGCATTACTGGTATTTTTCTTATTGCTTGCTACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    401 GTACAAACAATGTTGATGCATTACTGGTATTTTTCTTATTGCTTGCTACA    450

BSNT_02177___    451 TGGCTTCTCTTTAAAGCGATCAGAAAAGGAAAGCTGATCTGGCTGTTAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    451 TGGCTTCTCTTTAAAGCGATCAGAAAAGGAAAGCTGATCTGGCTGTTAGC    500

BSNT_02177___    501 AGCATTTTTCGTTGTTGGAGTAGGATTTAATACAAAAATGCTGCAGGCTT    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12880___yk    501 AGCATTTTTCGTTGTTGGAGTAGGTTTTAATACAAAAATGCTGCAGGCTT    550

BSNT_02177___    551 ACATGATTTTACCGGCTTTCTTATTGTTCTATCTGATTGCGGCAAACGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    551 ACATGATTTTACCGGCTTTCTTATTGTTCTATCTGATTGCGGCAAACGCC    600

BSNT_02177___    601 ACAATCAAGAAAAAAATCGTTTCATTGGTAAGTGCGTTAGCCGTATTAGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    601 ACAATCAAGAAAAAAATCGTTTCATTGGTAAGTGCGTTAGCCGTATTAGC    650

BSNT_02177___    651 AGCCGTTTCGTTATCGTGGCCGCTCATTGTCGACAATATCCCTGCAAGCA    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU12880___yk    651 AGCCGTTTCGTTATCGTGGCCGCTCATTGTTGACAATATCCCTGCAAGCA    700

BSNT_02177___    701 AGCGGCCTTATATCGGAAGCAGCCAAACCAACTCTGTTTTGGAATTGGCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    701 AGCGGCCTTATATCGGAAGCAGCCAAACCAACTCTGTTTTGGAATTGGCT    750

BSNT_02177___    751 TTCGGCTATAACGGAATCCAGCGGCTGACAGGCCAAAATTCAGGCGGCGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    751 TTCGGCTATAACGGAATCCAGCGGCTGACAGGCCAAAATTCAGGCGGCGG    800

BSNT_02177___    801 CCAGGGTGCGCCAAACAAAGACGCTTCAAAAGAAATGTCTTCTTCTGATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    801 CCAGGGTGCGCCAAACAAAGACGCTTCAAAAGAAATGTCTTCTTCTGATA    850

BSNT_02177___    851 ACACTCAAGCACCGCCTAATCAGTCATCAAGCAACAGCTCATCAAGCGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    851 ACACTCAAGCACCGCCTAATCAGTCATCAAGCAACAGCTCATCAAGCGAT    900

BSNT_02177___    901 GGTAAATCCTCAAATGGCAATATGGCGGCGCCTCCATCCAATGGCCAAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    901 GGTAAATCCTCAAATGGCAATATGGCGGCGCCTCCATCCAATGGCCAAAT    950

BSNT_02177___    951 GCCAAGCGGCGGTCAAGGAGGCCCTCCAAGCGGCGGAGATGGCGGCCAAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk    951 GCCAAGCGGCGGTCAAGGAGGCCCTCCAAGCGGCGGAGATGGCGGCCAAG   1000

BSNT_02177___   1001 GCGGACCCGGCGGAGACGGAGGGAAAGGCGGTACAGGAACCGGTTCGAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1001 GCGGACCCGGCGGAGACGGAGGGAAAGGCGGTACAGGAACCGGTTCGAAA   1050

BSNT_02177___   1051 ATGCAATCAGGTTCAGGGATGTTTGGAACGGGAACACCTGGTCCACTGCG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1051 ATGCAATCAGGTTCAGGGATGTTTGGAACGGGAACACCTGGTCCACTGCG   1100

BSNT_02177___   1101 GCTTTTCCAACAAGAGTTATCTGATCAAATCAGCTGGCTTCTGCCATTTG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1101 GCTTTTCCAACAAGAGTTATCTGATCAAATCAGCTGGCTTCTGCCATTTG   1150

BSNT_02177___   1151 CGATTTTTGGAATCGCAGGCTTACTGATCGCTGGCGCGAGAGAAAGAAGA   1200
                     ||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU12880___yk   1151 CGATATTTGGAATCGCAGGCTTACTGATCGCTGGCGCAAGAGAAAGAAGA   1200

BSNT_02177___   1201 AGATTATCTATAGAGCAGAAGGAAACGGTGTTCTGGGTTGCGTGGCTTGT   1250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1201 AGATTATCTGTAGAGCAGAAGGAAACGGTGTTCTGGGTTGCGTGGCTTGT   1250

BSNT_02177___   1251 ACCGATTGCCGGATTCTTCAGTGTCGCAGAATTTTTCCATCATTATTATC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1251 ACCGATTGCCGGATTCTTCAGTGTCGCAGAATTTTTCCATCATTATTATC   1300

BSNT_02177___   1301 TCATCATGCTGGCACCGCCGATTGCGGCTCTTGTCGGTGCGGGATGGGTT   1350
                     |||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU12880___yk   1301 TCATCATGCTGGCACCGCCGATTGCGGCTCTTGTCGGTGCGGGGTGGGTC   1350

BSNT_02177___   1351 GCTCTTGTTCATCTGTACCGCAATCAGACAGGCTGGAAAGCATGGCTTTT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1351 GCTCTTGTTCATCTGTACCGCAATCAGACAGGCTGGAAAGCATGGCTTTT   1400

BSNT_02177___   1401 GCCGGGAGCAATTATTGCGACAACTGGATTTGAATTGTTTATTCTCAGAA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1401 GCCGGGAGCAATTATTGCGACAACTGGATTTGAATTGTTTATTCTCAGAA   1450

BSNT_02177___   1451 ACTACAACGATCAAATCGGTGCAGGCTGGAGCATCGGTGTAGGTGTTATC   1500
                     |||||||||||||||||||||..||.|||||.|||||.||||||||||||
BSU12880___yk   1451 ACTACAACGATCAAATCGGTGTTGGATGGAGTATCGGGGTAGGTGTTATC   1500

BSNT_02177___   1501 GGCGTGTTGTCAGCGATTGCTTTGCTGCTGTTTAAACAGCGCCAAAAACC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1501 GGCGTGTTGTCAGCGATTGCTTTGCTGCTGTTTAAACAGCGCCAAAAACC   1550

BSNT_02177___   1551 GTTCAGTTATTATGTTTCACTTGCAGCTCTCCTCGCATTGCTGGTGATGC   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1551 GTTCAGTTATTATGTTTCACTTGCAGCTCTCCTCGCATTGCTGGTGATGC   1600

BSNT_02177___   1601 CGATTTACTGGGCAAGTACACCGCTTCTGTACGGAGGCAACAGCTCACTG   1650
                     ||||.||.||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1601 CGATGTATTGGGCAAGTACACCGCTTCTGTACGGAGGCAACAGCTCACTG   1650

BSNT_02177___   1651 CCTGAAACAGGCCCTCAGCTCGCATCAATGAGCGGAAAAGGCATGGGAAT   1700
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU12880___yk   1651 CCTGAAACAGGCCCTCAACTCGCATCAATGAGCGGAAAAGGCATGGGAAT   1700

BSNT_02177___   1701 GTCTGATGCGACTGTAAATGAAAAACTGATCAAATATCTAGAGGAGAATA   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1701 GTCTGATGCGACTGTAAATGAAAAACTGATCAAATATCTAGAGGAGAATA   1750

BSNT_02177___   1751 ACTCCGGAGCTGAATACCTATTCGCCACAACCGATTCGAACACAGCGGCA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1751 ACTCCGGAGCTGAATACCTATTCGCCACAACCGATTCGAACACAGCGGCA   1800

BSNT_02177___   1801 CCATATATCATTAAAACGAAAAAAGCTGTCATGGCTATTGGCGGATACAG   1850
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12880___yk   1801 CCATATATCATTAAAACGAAAAAAGCTGTCATGGCTATTGGTGGATACAG   1850

BSNT_02177___   1851 CGGTTCTGACCCGGCGATCACACTGACTCAATTCAAAAAACTTGTAAAAG   1900
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12880___yk   1851 CGGTTCTGACCCGGCAATCACACTGACTCAATTCAAAAAACTTGTAAAAG   1900

BSNT_02177___   1901 AAGGAAAAGTGAAATACTTCTTGGCTTCTGGAATGGGAAGAGGCGGAAAC   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1901 AAGGAAAAGTGAAATACTTCTTGGCTTCTGGAATGGGAAGAGGCGGAAAC   1950

BSNT_02177___   1951 AATGACATTGTTGAATGGGTTGAGAAAAATGGAAAAGAAGTAGCATCAGA   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   1951 AATGACATTGTTGAATGGGTTGAGAAAAATGGAAAAGAAGTAGCATCAGA   2000

BSNT_02177___   2001 AAAATGGCAATCAAGTTCTGATCAAAAAACAGAAAATACTGATTCGGCTG   2050
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12880___yk   2001 AAAATGGCAATCAAGTTCTGATCAAAAAACAGAAAATACTGATTCAGCTG   2050

BSNT_02177___   2051 ATACATCAAGCAGCAAGGCTTCAGGTGAAAACGGCAAAATGGGCGGACCT   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   2051 ATACATCAAGCAGCAAGGCTTCAGGTGAAAACGGCAAAATGGGCGGACCT   2100

BSNT_02177___   2101 GGCGGAATGAATCAGTCAGCAACATTATACGAACTACATGCTGATGAATA   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk   2101 GGCGGAATGAATCAGTCAGCAACATTATACGAACTACATGCTGATGAATA   2150

BSNT_02177___   2151 G   2151
                     |
BSU12880___yk   2151 G   2151


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