Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02185 and BSU12960

See Amino acid alignment / Visit BSNT_02185 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:43
# Commandline: needle
#    -asequence dna-align/BSNT_02185___dppE.1.22522.seq
#    -bsequence dna-align/BSU12960___dppE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02185___dppE-BSU12960___dppE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02185___dppE-BSU12960___dppE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02185___dppE
# 2: BSU12960___dppE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1650
# Identity:    1616/1650 (97.9%)
# Similarity:  1616/1650 (97.9%)
# Gaps:          18/1650 ( 1.1%)
# Score: 8016.0
# 
#
#=======================================

BSNT_02185___      1 ------------------ATGAAACGAGTGAAAAAGCTATGGGGCATGGG     32
                                       ||||||||||||||||||||||||||||||||
BSU12960___dp      1 ATGAAAAGGGGGAAGAGGATGAAACGAGTGAAAAAGCTATGGGGCATGGG     50

BSNT_02185___     33 TCTTGCATTAGGACTTTCGTTTGCGCTGATGGGGTGCACAGCAAATGAAC     82
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp     51 TCTTGCATTAGGACTTTCGTTTGCGCTGATGGGGTGCACAGCAAATGAAC    100

BSNT_02185___     83 AGGCCGGAAAAGAAGGCAGTCATGATAAGGCAAAAACCAGCGGAGAAAAG    132
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    101 AGGCCGGAAAAGAAGGCAGTCATGATAAGGCAAAAACCAGCGGAGAAAAG    150

BSNT_02185___    133 GTGCTGTATGTAAATAATGAAAATGAACCGACTTCATTCGATCCGCCGAT    182
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    151 GTGCTGTATGTAAATAATGAAAATGAACCGACTTCATTCGATCCGCCGAT    200

BSNT_02185___    183 CGGCTTTAATAATGTGTCATGGCAGCCGTTAAATAACATCATGGAGGGGC    232
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    201 CGGCTTTAATAATGTGTCATGGCAGCCGTTAAATAACATCATGGAGGGGC    250

BSNT_02185___    233 TGACGCGTCTTGGCGAAGATCATGAGCCCGAGCCGGCAATGGCGGAGAAA    282
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU12960___dp    251 TGACGCGTCTTGGCAAAGATCATGAGCCCGAGCCGGCAATGGCGGAGAAA    300

BSNT_02185___    283 TGGTCTGTTTCGAAAGATAATAAAACTTACACATTTACGATTCGGGAAAA    332
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    301 TGGTCTGTTTCGAAAGATAATAAAACTTACACATTTACGATTCGGGAAAA    350

BSNT_02185___    333 TGCGAAATGGACAAACGGAGATCCTGTAACAGCCGGAGACTTCGAATACG    382
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    351 TGCGAAATGGACAAACGGAGATCCTGTAACAGCCGGAGACTTCGAATACG    400

BSNT_02185___    383 CGTGGAAGCGGATGCTTGATCCGAAAAAAGGCGCTTCATCGGCATTCCTA    432
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    401 CGTGGAAGCGGATGCTTGATCCGAAAAAAGGCGCTTCATCGGCATTCCTA    450

BSNT_02185___    433 GGTTATTTTATTGAAGGCGGCGAAGCATATAACAGCGGGAAAGGGAAAAA    482
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    451 GGTTATTTTATTGAAGGCGGCGAAGCATATAACAGCGGGAAAGGGAAAAA    500

BSNT_02185___    483 AGACGATGTGAAGGTGACGGCAAAGGATGATCGAACCCTTGAAGTTACAC    532
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    501 AGACGATGTGAAGGTGACGGCAAAGGATGATCGAACCCTTGAAGTTACAC    550

BSNT_02185___    533 TGGAAGCACCGCAAAAATATTTTCTGAGCGTTGTGTCCAATCCTGCGTAT    582
                     ||||||||||||||||||||||.||||||||||||||||||||.||||||
BSU12960___dp    551 TGGAAGCACCGCAAAAATATTTCCTGAGCGTTGTGTCCAATCCCGCGTAT    600

BSNT_02185___    583 TTTCCGGTAAATGAAAAGGTCGATAAAGACAATCCGAAGTGGTTTGCTGA    632
                     ||.||||||||||||||||||||||||||||||||.||||||||||||||
BSU12960___dp    601 TTCCCGGTAAATGAAAAGGTCGATAAAGACAATCCAAAGTGGTTTGCTGA    650

BSNT_02185___    633 GGCGGATACATTTGTCGGAAACGGCCCGTTTAAGCTGACGGAATGGAAGC    682
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    651 GTCGGATACATTTGTCGGAAACGGCCCGTTTAAGCTGACGGAATGGAAGC    700

BSNT_02185___    683 ATGATGACAGCATCACAATGGAGAAAAGCGACACGTATTGGGATAAAGAT    732
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12960___dp    701 ATGATGACAGCATCACAATGGAGAAAAGCGACACGTATTGGGATAAGGAT    750

BSNT_02185___    733 ACAGTGAAGCTTGATAAGGTGAAATGGGCGATGGTCAGTGACAGAAATAC    782
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    751 ACAGTGAAGCTTGATAAGGTGAAATGGGCGATGGTCAGTGACAGAAATAC    800

BSNT_02185___    783 AGATTACCAGATGTTTCAATCAGGGGAACTTGATACCGCTTATGTCCCTG    832
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    801 AGATTACCAGATGTTTCAATCAGGGGAACTTGATACCGCTTATGTCCCTG    850

BSNT_02185___    833 CTGAGCTGAGTGATCAGCTGCTTGATCAGGATAACGTCAATATTGTTGAC    882
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    851 CTGAGCTGAGTGATCAGCTGCTTGATCAGGATAACGTCAATATTGTTGAC    900

BSNT_02185___    883 CAGGCGGGTCTCTATTTCTATCGATTTAATGTCAACATGGAGCCATTCCA    932
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU12960___dp    901 CAGGCGGGTCTCTATTTCTATCGATTTAATGTCAACATGGAGCCGTTCCA    950

BSNT_02185___    933 AAATGAAAACATCAGAAAAGCCTTTGCGATGGCTGTGGATCAAGAGGAAA    982
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp    951 AAATGAAAACATCAGAAAAGCCTTTGCGATGGCTGTGGATCAAGAGGAAA   1000

BSNT_02185___    983 TTGTAAAGTACGTCACGAAAAATAATGAAAAACCGGCGCGCGCCTTTGTA   1032
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU12960___dp   1001 TTGTAAAGTACGTCACGAAAAATAATGAAAAACCGGCGCACGCCTTTGTA   1050

BSNT_02185___   1033 TCGCCTGGGTTTACGCAGCCTGACGGCAAAGATTTCCGTGAAGCAGGCGG   1082
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1051 TCGCCTGGGTTTACGCAGCCTGACGGCAAAGATTTCCGTGAAGCAGGCGG   1100

BSNT_02185___   1083 AGACTTGATCAAGCCTAACGAAAGCAAAGCGAAGCAGCTGCTAGAAAAGG   1132
                     ||||.|||||||||||||||||||||||||||||||||||||.|||||||
BSU12960___dp   1101 AGACCTGATCAAGCCTAACGAAAGCAAAGCGAAGCAGCTGCTCGAAAAGG   1150

BSNT_02185___   1133 GCATGAAGGAAGAAAACTATAATAAGCTTCCTGCGATCACGCTTACTTAC   1182
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1151 GCATGAAGGAAGAAAACTATAATAAGCTTCCTGCGATCACGCTTACTTAC   1200

BSNT_02185___   1183 AGCACAAAGCCGGAGCATAAAAAGATTGCCGAAGCTATTCAGCAAAAATT   1232
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1201 AGCACAAAGCCGGAGCATAAAAAGATTGCCGAAGCTATTCAGCAAAAATT   1250

BSNT_02185___   1233 GAAAAATAGCCTTGGAGTCGATGTAAAGCTGGCCAATATGGAATGGAACG   1282
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12960___dp   1251 GAAAAATAGCCTTGGAGTCGATGTGAAGCTGGCCAATATGGAATGGAACG   1300

BSNT_02185___   1283 TATTTTTAGAGGATCAAAAAGCGCTGAAATTCCAATTCTCTCAAAGCTCA   1332
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1301 TATTTTTAGAGGATCAAAAAGCGCTGAAATTCCAATTCTCTCAAAGCTCA   1350

BSNT_02185___   1333 TTTTTGCCTGATTATGCAGACCCTATCAGTTTTCTGGAAGCCTTTCAAAC   1382
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1351 TTTTTGCCTGATTATGCAGACCCTATCAGTTTTCTGGAAGCCTTTCAAAC   1400

BSNT_02185___   1383 GGGTAATTCGATGAACCGCACAGGCTGGGCCAATAAAGAATACGATCAGC   1432
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1401 GGGAAATTCGATGAACCGCACAGGCTGGGCCAATAAAGAATACGATCAGC   1450

BSNT_02185___   1433 TGATCAAACAGGCGAAAAATGAAGCCGATGAAAAAACACGGTTCTCTCTT   1482
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU12960___dp   1451 TGATCAAACAGGCGAAAAACGAAGCCGATGAAAAAACACGGTTCTCTCTT   1500

BSNT_02185___   1483 ATGCATCAAGCTGAAGAGCTGCTCATCAATGAAGCGCCGATCATCCCGGT   1532
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU12960___dp   1501 ATGCATCAAGCTGAAGAGCTGCTCATCAATGAAGCGCCGATCATTCCGGT   1550

BSNT_02185___   1533 TTATTTTTATAATCAGGTTCACCTGCAAAATGAACAAGTAAAGGGAATTG   1582
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12960___dp   1551 TTATTTTTATAATCAGGTTCACCTGCAAAATGAACAAGTAAAAGGAATTG   1600

BSNT_02185___   1583 TCCGTCACCCTGTCGGCTATATCGATTTAAAATGGGCAGATAAAAACTGA   1632
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12960___dp   1601 TCCGTCACCCTGTCGGCTATATCGATTTAAAATGGGCAGATAAAAACTGA   1650


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.