Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02193 and BSU13020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:44
# Commandline: needle
# -asequence dna-align/BSNT_02193.1.22522.seq
# -bsequence dna-align/BSU13020___ykgA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02193-BSU13020___ykgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02193-BSU13020___ykgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02193
# 2: BSU13020___ykgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity: 467/861 (54.2%)
# Similarity: 467/861 (54.2%)
# Gaps: 387/861 (44.9%)
# Score: 2307.0
#
#
#=======================================
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 1 ATGGACGTATCCATCCCGAAATCTCAGCACAAAACGGTATGCCGAACGGA 50
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 51 ATACGGCACACTTCAAAAAGTGATCTTATGCAAACCTGAGCACATGACCA 100
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 101 TAAAAGATGTTATAAACGAAACACAAAAACATTTTGAAGATGACAATATT 150
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 151 CATGTAAAAACCGCTAACGACCAGCACAGCCGCTTAGTGGAGGCACTTAG 200
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 201 GTCACACAACGTTGAGGTCGTCCTTTTGCCCGTTCGCGACGGACTCCCAG 250
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 251 AACAGGTTTTTACTAGGGACATAGGATTTGTCATCGGAGAAAAAGCCTTT 300
BSNT_02193 0 -------------------------------------------------- 0
BSU13020___yk 301 CTGTCAAGCATGACTGAACCGATTCGCCAAGGAGAAGAAGCCGTTATAAA 350
BSNT_02193 1 -------------------------------------ATGCTTGATACGA 13
|||||||||||||
BSU13020___yk 351 AGATTTTTTTCACAGCCAAGGTATCTCTTACACCCGCATGCTTGATACGA 400
BSNT_02193 14 GTATTGAAGGCGGAGACGTCATTATCGATGATGACATTGTCTATGTCGGA 63
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 401 GTATTGAAGGCGGAGACGTCATTATCGATGATGACATTGTCTATGTCGGA 450
BSNT_02193 64 ATCAGCCAGCGCACCGTCATTTCAGCTATCGGCCAGCTGGAAGAGGCACT 113
||||||||||||||||.|||||||||||||||||||||.|||||||||||
BSU13020___yk 451 ATCAGCCAGCGCACCGACATTTCAGCTATCGGCCAGCTAGAAGAGGCACT 500
BSNT_02193 114 TCCTGAGTATACGATCGTTCCAGTGAAGCTGCATGAAAAATTTTTGCATT 163
||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU13020___yk 501 TCCTGAATATACGATCGTTCCAGTGAAGCTTCATGAAAAATTTTTGCATT 550
BSNT_02193 164 TGGACTGCGTATTTAACATTGTATCTGAAAGCGAAGCGTTAATTTATCCA 213
||||||||||||||||||||.||||||||||||||||||||||||||.||
BSU13020___yk 551 TGGACTGCGTATTTAACATTATATCTGAAAGCGAAGCGTTAATTTATTCA 600
BSNT_02193 214 CAGGCCATTGAGCCAGATGCAGCCGATATGCTGGCAAAACGTTATGATCT 263
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 601 CAGGCCATTGAGCCAGATGCAGCCGATATGCTGGCAAAACGTTATGATCT 650
BSNT_02193 264 TATTGAGGTGCCCGAGGACGAACAATTTACGCTTGGCACCAACGTCCTTT 313
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 651 TATTGAGGTGCCCGAGGACGAACAATTTACGCTTGGCACCAACGTCCTTT 700
BSNT_02193 314 CAATCGAAAAAAAAACGATCATCAGTCTCCCTGGCAACCGCCATGTCAAT 363
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 701 CAATCGGAAAAAAAACGATCATCAGTCTCCCTGGCAACCGCCATGTCAAT 750
BSNT_02193 364 CAACAGCTATCGAAAAGAGGCTATCACATTATCGAAATTGACCTGTCAGA 413
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 751 CAACAGCTATCGAAAAGAGGCTATCACATTATCGAAATTGACCTGTCAGA 800
BSNT_02193 414 AATTATTAAATCAGGCGGCTCCTTCAGGTGCTGCACAATGCCGCTGATTC 463
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13020___yk 801 AATTATTAAATCAGGCGGCTCCTTCAGGTGCTGCACAATGCCGCTGATTC 850
BSNT_02193 464 GAGGCGAATGA 474
|||||||||||
BSU13020___yk 851 GAGGCGAATGA 861
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