Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02224 and BSU13220

See Amino acid alignment / Visit BSNT_02224 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:48
# Commandline: needle
#    -asequence dna-align/BSNT_02224.1.22522.seq
#    -bsequence dna-align/BSU13220___thiW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02224-BSU13220___thiW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02224-BSU13220___thiW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02224
# 2: BSU13220___thiW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1644
# Identity:    1601/1644 (97.4%)
# Similarity:  1601/1644 (97.4%)
# Gaps:           0/1644 ( 0.0%)
# Score: 7833.0
# 
#
#=======================================

BSNT_02224         1 ATGCAAGCCTTTGATGAGCTTCTTAAGGTTGACGAGCTCAGCTTCTCTTA     50
                     |||||||||||||||||||||||.|.||||||..||||||||||||||||
BSU13220___th      1 ATGCAAGCCTTTGATGAGCTTCTGACGGTTGAGCAGCTCAGCTTCTCTTA     50

BSNT_02224        51 TGAAGAAGACGAGAAACCGGTTTTTCAAGACATTTCGTTTGAGCTTCAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th     51 TGAAGAAGACGAGAAACCGGTTTTTCAAGACATTTCGTTTGAGCTTCAAA    100

BSNT_02224       101 AAGGAGAATGTGTTTTATTATTAGGACCGAGCGGGTGCGGTAAAAGCTCG    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU13220___th    101 AAGGAGAATGTGTTTTATTATTAGGACCGAGCGGATGCGGTAAAAGCTCG    150

BSNT_02224       151 CTCGCCCTTTGTTTAAACGGTCTATATCCGGAGGCTTGCGACGGCATTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    151 CTCGCCCTTTGTTTAAACGGTCTATATCCGGAGGCTTGCGACGGCATTCA    200

BSNT_02224       201 GTCCGGACATGTATTTCTATTTCAAAAGCCGGTCACAGATGCTGAGACCT    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU13220___th    201 GTCCGGACATGTATTTCTATTTCAAAAGCCGGTCACAGATGCTGAAACCT    250

BSNT_02224       251 CCCAAACGATTGCTCAGCATGCCGGGGTCGTTTTTCAGGATCCTGATCAG    300
                     ||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU13220___th    251 CCGAAACGATTACTCAGCATGCCGGGGTCGTTTTTCAGGATCCTGATCAG    300

BSNT_02224       301 CAGTTCTGCATGCTGACGGTGGAGGACGAAATTGCATTCGGGCTGGAAAA    350
                     ||||||||||||||||||||||||||||||||.||.||||||||||||||
BSU13220___th    301 CAGTTCTGCATGCTGACGGTGGAGGACGAAATAGCGTTCGGGCTGGAAAA    350

BSNT_02224       351 TCTGCAAATTCCAAAAGAAGAAATGACAGAGAAAATCAACACCGTATTAG    400
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU13220___th    351 TCTGCAAATTCCAAAAGAAGAAATGACAGAGAAAATCAACGCCGTATTAG    400

BSNT_02224       401 AAAAATTGCGCATTACCCATTTAAAAGAAAAAACGATATCTACCCTTTCA    450
                     |||||||.|||||||||||||||||||||||||.|||.||.|||||||||
BSU13220___th    401 AAAAATTACGCATTACCCATTTAAAAGAAAAAATGATCTCAACCCTTTCA    450

BSNT_02224       451 GGAGGACAAAAGCAAAAAGTGGCTCTCGCCTGTATTTTGGCGATGGAGCC    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU13220___th    451 GGAGGACAAAAGCAGAAAGTGGCTCTCGCCTGTATTTTGGCGATGGAGCC    500

BSNT_02224       501 TGAGCTTATTATTTTAGATGAGCCGACCTCTCTTTTAGACCCTTTCTCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    501 TGAGCTTATTATTTTAGATGAGCCGACCTCTCTTTTAGACCCTTTCTCAG    550

BSNT_02224       551 CGCGGGAGTTCGTTCATCTGATGAAGGATCTTCAGCGGGAAAAAGGTTTC    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    551 CTCGGGAGTTCGTTCATCTGATGAAGGATCTTCAGCGGGAAAAAGGTTTC    600

BSNT_02224       601 AGCCTCCTCGTCATTGAGCACCAGCTTGATGAATGGGCGCCTTGGATTGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    601 AGCCTCCTCGTCATTGAGCACCAGCTTGATGAATGGGCGCCTTGGATTGA    650

BSNT_02224       651 GAGAACGATCGTACTCGACAAATCAGGCAAAAAGGCGCTGGATGGCTTGA    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||.|||
BSU13220___th    651 GAGAACGATCGTACTCGACAAATCAGGCAAAAAGGCACTGGATGGCCTGA    700

BSNT_02224       701 CGAAAAATCTATTTCAGCATGAAGCGGAGACACTAAAGAAATTGGGCATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    701 CGAAAAATCTATTTCAGCATGAAGCGGAGACACTAAAGAAATTGGGCATC    750

BSNT_02224       751 ACCATTCCAAAGGTCTGTCATCTGCAGGAAAAGCTGAGTATGCCGTTTAC    800
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th    751 GCCATTCCAAAGGTCTGTCATCTGCAGGAAAAGCTGAGTATGCCGTTTAC    800

BSNT_02224       801 TTTATCAAAAAAGATGCTGTTCAAAGAGCCTATTCCTCCCGGGCATGCCA    850
                     ||||||||||.||||||||||||||||||||||||||.|||||||||.||
BSU13220___th    801 TTTATCAAAAGAGATGCTGTTCAAAGAGCCTATTCCTGCCGGGCATGTCA    850

BSNT_02224       851 AAAAGAAGGAAGCTCCTTCTGGGGAGAGTGTGCTTGAAGTCAGCAGCCTT    900
                     ||||||||.||||.||||||||||||||||||||||||||||||||||||
BSU13220___th    851 AAAAGAAGAAAGCCCCTTCTGGGGAGAGTGTGCTTGAAGTCAGCAGCCTT    900

BSNT_02224       901 TCGTTCGCGAGAGGACAGCAGACGATTTTCAAAGACATCAGCTTTTCGTT    950
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13220___th    901 TCGTTCGCGAGAGGACAGCAGGCGATTTTCAAAGACATCAGCTTTTCGTT    950

BSNT_02224       951 GCGCGGAGGCTCTTTAACGGCGCTTGTTGGTCCGAATGGCACTGGAAAAT   1000
                     |||||.|||||||||||||||||||||.||||||||.||.||||||||||
BSU13220___th    951 GCGCGAAGGCTCTTTAACGGCGCTTGTCGGTCCGAACGGAACTGGAAAAT   1000

BSNT_02224      1001 CGACGCTCTTATCAGTTCTGGCCCGTCTCATGAAACCGCAAAGCGGCAAA   1050
                     ||||||||.||||||||||||||.||||||||||||||||||||||||||
BSU13220___th   1001 CGACGCTCCTATCAGTTCTGGCCAGTCTCATGAAACCGCAAAGCGGCAAA   1050

BSNT_02224      1051 ATCCTTCTCTATGACCAGCCGCTGCAGAAATATAAAGAAAAAGAATTGCG   1100
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU13220___th   1051 ATCCTTCTCTATGATCAGCCGCTGCAGAAATATAAAGAAAAAGAATTGCG   1100

BSNT_02224      1101 TAAACGGATGGGATTTGTTTTTCAAAACCCTGAGCATCAATTCGTCACCG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1101 TAAACGGATGGGATTTGTTTTTCAAAACCCTGAGCATCAATTCGTCACCG   1150

BSNT_02224      1151 ATACGGTGTATGACGAGCTTCTGTTCGGCCAGAAAGCAAATGCTGAAACT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1151 ATACGGTGTATGACGAGCTTCTGTTCGGCCAGAAAGCAAATGCTGAAACT   1200

BSNT_02224      1201 GAGAAAAAAGCGCAACACCTGCTGCAGCGTTTTGGTCTTGCGCATTTGGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1201 GAGAAAAAAGCGCAACACCTGCTGCAGCGTTTTGGTCTTGCGCATTTGGC   1250

BSNT_02224      1251 TGATCATCATCCGTTTGCGATCAGCCAAGGGCAAAAACGGCGACTGAGCG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1251 TGATCATCATCCGTTTGCGATCAGCCAAGGGCAAAAACGGCGACTGAGCG   1300

BSNT_02224      1301 TAGCTACTATGCTCATGCATGACGTAAAGGTTTTATTATTAGACGAACCA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1301 TAGCTACTATGCTCATGCATGACGTAAAGGTTTTATTATTAGACGAACCA   1350

BSNT_02224      1351 ACCTTTGGCCAGGATGCCCGCACGGCGGCTGAATGCATGGAAATGATTCA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13220___th   1351 ACCTTTGGCCAGGATGCCCGCACGGCGGCTGAATGCATGGAAATGATTCA   1400

BSNT_02224      1401 GCGTATCAAGGCAGAGGGAACCGCTGTCCTTATGATTACACACGATATGG   1450
                     .||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13220___th   1401 ACGTATCAAGGCAGAGGGAACTGCTGTCCTTATGATTACACACGATATGG   1450

BSNT_02224      1451 AGCTAGTCTCTTCGTATGCTGACAGCGTGCTTGTGCTTCACGATACGGGC   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU13220___th   1451 AGCTAGTCTCTTCGTATGCTGACAGCGTGCTTGTGCTTCACGATACAGGC   1500

BSNT_02224      1501 CTGGCCTTTGACGGATCTCCAGCTCAGTTGTTTTCTCAAGAAACTGGGCT   1550
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
BSU13220___th   1501 CTGGCCTTTGACGGATCTCCAGCGCAGTTGTTTTCTCAAGAAACAGGGCT   1550

BSNT_02224      1551 TGTCCAAAAAGCAAAGCTCACCCTCCCCCTTCTATATAAATGGATGGCAT   1600
                     |||.||||||||||||||||||||.||||||||||||.||||||||||||
BSU13220___th   1551 TGTTCAAAAAGCAAAGCTCACCCTTCCCCTTCTATATGAATGGATGGCAT   1600

BSNT_02224      1601 ATCAAGAGGAGGTGCGTGATGAAGCAGCCGTTACATCTCATTAA   1644
                     .|||||||||||||||||||||||||.|||||||||||||||||
BSU13220___th   1601 TTCAAGAGGAGGTGCGTGATGAAGCAACCGTTACATCTCATTAA   1644


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