Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02232 and BSU13270

See Amino acid alignment / Visit BSNT_02232 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:48
# Commandline: needle
#    -asequence dna-align/BSNT_02232.1.22522.seq
#    -bsequence dna-align/BSU13270___ykoI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02232-BSU13270___ykoI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02232-BSU13270___ykoI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02232
# 2: BSU13270___ykoI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     417/681 (61.2%)
# Similarity:   417/681 (61.2%)
# Gaps:         261/681 (38.3%)
# Score: 2063.0
# 
#
#=======================================

BSNT_02232         1 ATGACTAAAACAATAAAAACAGTATCTTTTGCTGCAGCAGCCATTTTAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk      1 ATGACTAAAACAATAAAAACAGTATCTTTTGCTGCAGCAGCCATTTTAGT     50

BSNT_02232        51 AGTCATCATCTGTACGTTTCTCATCATTCGGCAAACCCATGAGAACGTAT    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk     51 TGTCATCATCTGTACGTTTCTCATCATTCGGCAAACCCATGAGAACGTAT    100

BSNT_02232       101 TGTCAAAGGAGACTGTCGTAAAAAAAGTCGAAGCCTCTTATGAAGGCAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk    101 TGTCAAAGGAGACTGTCGTAAAAAAAGTCGAAGCCTCTTATGAAGGCAAG    150

BSNT_02232       151 GTCACGAAAGCAACACAATCAAAGGATAAAAAAACATATGATATAACCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk    151 GTCACGAAAGCAACACAATCAAAGGATAAAAAAACATATGATATAACCCT    200

BSNT_02232       201 TGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk    201 TGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTG    250

BSNT_02232       251 ACATTCTTTCAATGAATAGAGTAAAAGCAGTGAATCCATCTGCCATGACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13270___yk    251 ACATTCTTTCAATGAATAGAGTAAAAGCAGTGAATCCATCTGCCATGACA    300

BSNT_02232       301 GAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACGGTC-A    349
                     |||||||||||||||||||||||||||||||||||||||||||||||| |
BSU13270___yk    301 GAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACGGTCAA    350

BSNT_02232       350 AAAACAAACACGGCAAAGTCGAGTTGCCACTTATACCATACAAAAAGAAG    399
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU13270___yk    351 AAAACAAACACGGCAAAGTCAAGTTGCCACTTATACCATACAAAAAGAAG    400

BSNT_02232       400 ATGGGAAAACATACGAAGTGA-----------------------------    420
                     |.|||||||||||||||||||                             
BSU13270___yk    401 ACGGGAAAACATACGAAGTGAAGGTAGACATGCAGGCAAAAACAGTCTTG    450

BSNT_02232       420 --------------------------------------------------    420
                                                                       
BSU13270___yk    451 TCTGCCGATCAAATCAGCAGCAAAGATCAACAAAAAACGCCGATTACGAA    500

BSNT_02232       420 --------------------------------------------------    420
                                                                       
BSU13270___yk    501 AAAAGAAGCCAAAACAATTGCAGAGCGAAAAACGGGCGGAACAGCGGATG    550

BSNT_02232       420 --------------------------------------------------    420
                                                                       
BSU13270___yk    551 ACGCAGATCTCGAAGAAAGTGAGGGCACTCTCATCTTTGAAGTAGACGTT    600

BSNT_02232       420 --------------------------------------------------    420
                                                                       
BSU13270___yk    601 GATCTTCCTGATAATAAGGAAGCGACAGTGAAAATCAATGCCTACACAGG    650

BSNT_02232       420 -------------------------------    420
                                                    
BSU13270___yk    651 AAAGGTAGCTAACATTGTGTATGAAGACTGA    681


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